Ll_transcript_422089

• Id Trinity: TRINITY_DN47959_c1_g2_i17
• Name Transcript: Ll_transcript_422089
• Sequence: ATTCATACTATTTGGATACTTAAAATAAAATAAATTTTCTTTCATAGCTCACAAGAGAAAGAAACGCGTCACGCTAGATTATCGTCTCTGTGCAACAACC AACCATTCACAATTTATTGCTATCATTTTTTCATCGAAACCACAAACCCTAGTTTCAAACCAAACACATCTTTCTTTCATAAACATAATTCTTTCATAAT TTCATTTTAATTTACAATTACTAATTTAATTGCAGCAAAAGAATCACAGGTTTAGTAGGAGACGGTTGTTGTACCTTAGGTTGAAGCCTATACTGATTGC CAACTCGAGATATGATGAACGGAACTCAATATAGTGGTGAAAGTTCCAGTTCAACTTCTCGTAATAGTCAGCAAGATATTGAGGATGATGGGATGATTGC TCTTGTTCTGTCTGAAGAGTATGCAAAATTGGATGGTGCAGTTGGTCGACGCCTTACGAATTTGGCACCTGTTCCTCATGTGCCCCGGATAAATTCTTTC ATCCCCAACATGAGTGATGCTAGTATGGACCATCAACGTCTTCTTCAGAGGTTGAACATCTATGGTCTATGTGAAGTTAAAGTCTCTGGAGATGGAAACT GCCAGTTCCGTGCACTTTCGGATCAGCTTTTTAGGTCATCTGAACACCATAAATATGTTAGAAAAGAGATTGGAAAACAGATCAAAGATCACAGGTCCTT GTATGAATGCTATGTACCAATGAAGTATAAGCGATATTACAAGAAAATGGCAAAATCTGGAGAGTGGGGGGATCATGTTACCTTGCAGGCTGCTGCTGAT AAGTTTGCAGCGAAGATATGCCTGTTGACATCATTCAGAGACACTTGTTTCATTGAAATTATGCCATTATACCAAGCACCTAAGCGTGGTAAGATCACCT CAAACGCTCATGTACATGAACAGTTCATCGGCCTTTTAATGTTTAAAAAAATATGCACAGGCCGAGCTTACAGCGGTGATCTCGGCCTAAAAGGTTTTCT ATAAGTTTTTTCTAATATGTAGTCTTGACTCTTGAGGAAGGTTATGCATCAGAGGTATCATACATGGCCCTCCCTGAAATATTTTGAAATAGTTTGTGGT TCCGACAAAAGTTATTTTTTTCCATAATGTGAGTCACAGAGCCAGTCTTCCAACCGAAAACCGGGTCACGACAGCTGCAAACTACAAGCCTGTTGTAATT AATTCCACAAGTTCACGAGTTGGTGCTATCTTTTAAAGTCAAGGATGTAATAATTAAAATTCTACAGTCCAATGCCCATAAAAAACTTCATGAGGTGATA AAAGAGCAAAATCAAGAGAATTGCAGATATGCATATGAGCTTCAAATGGGATATAAAAAAGGGCCAGCATGTTTGAATTGTCTATTTTTGCATTTACTTT AGAACCTCTCCTATCTTTAATTTTGAAATTGTCAAAAGTATCCTCTTATTCCTTTCTTTCCCTTGACTTTCATGCAGAGTTGTGGTTAAGCTTCTGGTCT GAGGTTCATTACAATTCACTATACGAAATTCGAGATGCACCAATCCAACATAAACCAAGAAGGAAACACTGGTTATTCTAGGAAAGATAGAGTTTAAGCA TGAACCAGCACTGTTGTTTTACATTTAAATATATCCTTGCTACCACCTTCATGCTTGAAGACTCTAATCAGTGGTTCATCCATTGATCTTTCAGCTATCA GCTCCATGCTTCCAAGCCAAAGAGTAGAAATATTAGGCATCCTTTAAGAATGCAAATTGGGTATTGTACATTTTTTTAAGTTTATGAAAGTAATTCAAAC ATTGAAAATTGGTGTATTTGTCTGGAGGAAAATACAGTATAATTTTTATACTGAATTGTGTACCATTTAAGTCACCTTTGATTTCTCTCAACATGTGTAT TGGTAATTGGTTTGCATAATAAAATGATATTAAATTGCATTGAGTTGGCTCATTAAAAA
• Tissue: pods
• Gene name: LI_gene_156951;
• Additional information: details;

Expression of Ll_transcript_422089

FPKM

• PAB: 3.1
• PNAB: 1.1
• PS1: 2.1
• PS2: 3.2
• PS3: 2.3
• PW1: 1.3
• PW2: 3.4
• PW3: 4.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_422089

• Blastp: OTU domain-containing protein DDB_G0284757 from Dictyostelium with 36.09% of identity
• Blastx: OTU domain-containing protein DDB_G0284757 from Dictyostelium with 36.09% of identity
• Eggnog: OTU-like cysteine protease(ENOG4111GFM)
• Kegg: Link to kegg annotations (DDB_G0284757)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430191.1)
• Pfam: OTU-like cysteine protease (PF02338.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;