Id Trinity | TRINITY_DN47963_c1_g1_i7 |
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Name Transcript | Ll_transcript_421862 |
Sequence | CATGTGGATGAAAAAAATATCCCCTATGAGAGTTAACCCATATATATGTGGATGTTTCCGATTGGACAGGATTCTCTCGAGTGCGATGATAAATGTGAGA AACAAAAGAAAAAAATATCACAGAAGAATATAAATGAAGATTTTAGTTTTGAGACTGCTATGACATTGCCAAGTATAAATTTTGTGAGGAAAAAACATGT GGATGAGAGAAAATGGAAGGGCCCTTTTCCTTTATGAATGAGTTAGTTGAAGAGATATAAATAGTGGCAGTAGAGTTGAGATGATCCAAAAGTAAGAGCC ATGGATACCATGGTCACTTTGGAAAAAGATCTAAGTAACATGAGAGATTATTATGAGAGTGAAATTACAAAGGAATGTTCTTGGAGAGAGTCACAGCTCA AAGGTTTGCGTCGTTTCCTCATTGAAAAAGAGGAACAAATCTTGAAGGCTCTCATGCAAGATTTAGGGAAACATCAAGTTGAAGCTTTTAGAGACGAGGT AGGGACAGTGATGAAATCCTTAAATTTCGCATTGAAGCATTTGAAATATTGGATGTCAGCGAAAAAGGCAAAATTGCCACAATTAGCATTGCTTACCAGT GCTGAACTTGTTCCGGAACCTTTAGGCCTTGTCCTCATCATTTCATCTTGGAATTTCCCATTTGGTCTATCACTGGAGCCACTTATAGGAGCAGTAGCTG CAGGAAACACAGTAGTGTTAAAACCTTCAGAGTTATCTCCAGCATGCTCTTCTCTGCTTGCATATGGTATCTCCACTTATTTGGACAAAGAAGCCATTAA GGTTGTCCAAGGTGGAGCACTTGAGTCTCAGAAATTACTTCACCAAAGATGGGACAAAATTTTCTTTACAGGAAGTGCACGTGTGGGGAGGATAGTGATG AGTGCAGCTGTTAAGCATTTAACGCCTGTTACTCTTGAGTTGGGTGGAAAATGTCCTGCTGTTGTTGATTCTCTTTCATCTTCCTTTGACAAAGCTGTGG GTTCAACAATTAATGATTCTCTTGTTTTTGCTCAATTCTTCATGGGGTCTCATGCTGCCCGATACGGTTGTGTTGCGGCCTGATGCGGTCCCATGTGGTT GCGTTGCAGCTTGTTGCAGTCATGTTACTGTGATTCGATATCACACTGCAACTGCGGTATGATGCGGTTGCGGTGATCACTGGAACCGCAATATTGCGGC CGCATCATGTGATGCTGTCCACAATTTAATACACTTTTTCAACACAAATCTTTCATACCATTATTCTTGGATGATATAAAATAATGGGTATGGAAGATTT ATCTTCGATTGTTTAGTTTACTTAAGAAAGTCACTCTTTTTTTGGTAATTAATCAAAAGGTAACTGTGAAGAGGATTATTGTGGGGAAATTTGGGACGTG TGCTGGTCAAGCATGCATAGCAATTGACTATGTCATTGTGGAAAATGGATATTCTTCAACACTGGTACATACATCTCTTATGTAAATTTTATGTTATGTG GTGTGTTTTTTGATATTATTTTGATTAGGATATAGGGGTATGTGCTTACTCTTGGTTTTTTCTTTCTTTAGGTGGAATTGATGAAGGTCTGGATCAAGAA AATGTTTGGAGAGAACCCAAAAAATTCCAATACTATTGCGAGGATTGTTAATAAACAACATTTCCTTAGATTGAAGAATCTTCTTACTGATCCAGAGGTC AAAAAGTCTGTGGTTTATGGTGGCTCAATGGACGAAGATAATTTGTAATCAACCAACACTTTCTCACCTTTCAATCTATTGAATCATAGTCATTCATCAT CATAAACATCTTTCTAATTTAATAGAAAAGTTTTACAATTTTTTATTCTTAAGATAATGATACATTTACTAATTTTTTATTTATACATGTTAAGTTTAAT TTAAGAGAGTTTTTAAAATAATGTAAAAGAAGATATAGATAATTTTTGTAGTTCAGTCACTCCACTTAAAAGTCACTTTAAATTTTTTACATACTATTTT ACACTTTCAAGTTGAATTATGATTATGATTTTTTGAAATAGAAAAAAACATATTTGATTGCGGAAAGTGGATAAATAATTTAAATTGTTAATATTCTCTC TCAACAACTCAGCCCATTAGTAATTGCTTGAATAATATTTACATTATTTTACATTTTGTGGCGTATGAATGTGCCTCTATAATTGCTTCACTCTTTCACT ATGATTATAAAAAGGTACGACTAATTTGTTTTACTAGATTTATTAGGCAAAAATACTCTAAAAAGGAAACGGTATGTGTTCAAAATCTATGCAGATTTAT TGAGCCAACAATCTTGGTGGATCCTCCACTTGATGCAGCAATCATGGCAGACGAAATATTTGGCCCACTGCTTCCAATCATTACGGTGGAGAAGATAGAA GATAGTATTAAATTCATAAGATCTAGGCCAAAGCCTCTTGCCCTTTATGTTTTCACCAAAAACCAAACACTGCAGAGAAGAATGATATCTGAAACATCCT CTGGCAGTGTGACTTTCAATGATGCAATTCTACAATATGCTGCAGATTCTCTCCCATTTGGAGGTGTAGGTGAAAGTGGGTTTGGCAAGTACCATGGGAA GTTCTCTTTTGACACATTCAGCCACGAGAAGGGAATAGTGAGAAGAAGTTTCCTAACTGATTTTTGGTATAGATATCCTCCTTGGACACTTAATAAGTTT CAACTACTTGAGGTCTCTTACAACTATGATTATCTGGGACTGTTACTTGTTCTGCTTGGCTTAAAGAGATCACCAAAACGCAGATCATATTTGGTTTGCC AATAGTTCTTTTGTTTTATTCAGTTGCTCTACTTAAGAGTAAGGCCAATAACAATATGTGTATACTTAATCAGTTATATATCAATGCTGCTGGTAATATG TATTTACAATCTTAGGTCTGCGTTTAAGAAAATTAAATAAAGGATTCCTTATTCAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_156996; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_421862
Blastp | Aldehyde dehydrogenase family 3 member F1 from Arabidopsis with 52.29% of identity |
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Blastx | Aldehyde dehydrogenase family 3 member F1 from Arabidopsis with 52.29% of identity |
Eggnog | Dehydrogenase(COG1012) |
Kegg | Link to kegg annotations (AT4G36250) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448596.1) |
Pfam | Aldehyde dehydrogenase family (PF00171.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |