| Id Trinity | TRINITY_DN47964_c5_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_424160 |
| Sequence | CTAGGTGTTACACCTTTATAGAAACAATTTCTTGATAAATTAGTAATGGTATTACTAAAGTAAAAGAATAAATAAAAAAACATTATTCTGTTAAAGTCAT TGACCTATATATATTCCCGAAACTATTATATTGCATTAGTCTGAAGGCTTCTTCATCATTGTTTTGAGTAGAGAATCAATGGTGGATTTTCCGAAGTGAA AGAAAAAACTGAACTTCTTCATTTTCCTTATCACTTTGGGGCACCCCATTTCAAAGGGTAGTAGTTGTTTTAACTTTGGGACGGTGCCTCTGACTTTGTT GAACGTGATACTCATAACTCATTCGTGGGTAATAGTTTATATAGCAACAGGTAATAATGTTCCTAAACAATTATATGCATGTCTCATGTTTTTGTTCACT TTTGAAGAATATAATCATACTCTCTTGTTTCATGTTTCAACTTTTTTGCAATTCAGAATTTTGATGGGTTTCCTGGTTTGGTTTCAGAATTTGTAAAATT GTTGTTTTTTATTATTAAGGATTGAGGATGTTAGGAGAATTCATAACTCGGTGTCTTATGTAAGTTCATGTTTCTTTTTGTTTCAACTTATGATTCTTTT AAACATGTTTGGTTGATTACTATGTTATCTAACATTTGTGTATAATTTTTTGTTTGAATTGAAGATTGCTTTTGGGGTATGCATACCCTGGATTTGAATG TTATAAAACTGTGGAGAGGAATAAAGTTGATTTTGAAGAACTTCGGTTTTGGTGCCAATACTGGATCATTGTGGCACTTTTCACAGTACTGGAAAAGTTT GCAGATGTAGTTATTGGATGGTTACCCTTGTATGGAGAGATGAAACTTGCCCTATTTATCTACTTATGGTATCCCAAAACTAAGGGAACAGGATATGTTT ATGAGAATGTGTTGAGGCCTTATGCATCAAAACATGAAAATGATATTGACATAAAGTTCCAAGAGTGGAGAACTAGAGCATGGGACTTGGCTATATTTTA TTGGCAAAATTGCACAGAATTGGGCCAATCAGCAACTTTTCAGGTCCTAGATTTCTTGACTGCTCAGCATACAAAATTTTCAGGCAAAACCAAAAATACT AAGAAAAAAGAGAAGGAGGATCCAATCACATTATATCCTCCAAGTGCCCCACCTTTACCTGACATAAGAGCATCTCTATTTCAAAATAGTGAACACAATT TCAAAGGCAAGAACAAGAAGTGGATTTGACATTCAAGTAGAAGATTAAATGATGGCTTTATATGTACATATTCACTTTAAGCCTAGGAAAAGAGAATGGG CCAATATGGTTGTAACTTATGTGCTGAAAATTGCTTTTATTTTTTGTTGACCAAAAATTGTTTTAACCCTCTCTTTTGAAACAATTTTATTTGTAAATAA TTTATTATTCTTTTATGCGTCTTCTACTTGTATTACATGACAACAATTTGAGCCAAAGCTTAAAAAGTGTAGGCAATTTCAATCATGTACTGAAAGCAAA GGACTAACATGAGTTATTAGATTCTGAATTGGAGTCAATTATCGAAATTATAAAATTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_157012; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_424160
| Blastp | HVA22-like protein i from Arabidopsis with 48.04% of identity |
|---|---|
| Blastx | HVA22-like protein j from Arabidopsis with 58.57% of identity |
| Eggnog | receptor accessory protein(COG5052) |
| Kegg | Link to kegg annotations (AT5G42560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456267.1) |
| Pfam | - |
| Rfam | - |
| GO | - |