Ll_transcript_423641

• Id Trinity: TRINITY_DN47966_c5_g1_i1
• Name Transcript: Ll_transcript_423641
• Sequence: CTCCTTCAAAATGAAATATTTAATCTTGATAAAAAAATAAAAAGAGGGAAGGTGAGAAAATAAAGCAGTGTGAAACCCTAGTAAGTTAATTGAATCGTGA AGTGAGTTGTGAATGGAACTAACATGGTTGAGTTTCATTCTTGTTGGGGCTTTCGGTTACTTCATCGGTTCTCATTATCCTTCTCGCTTTCTCCTTTCCT CACTTCGCTCTCTTCCTAAAGACAACAACTTCAATAACAAGAACAATTCTAAATCCAAATTCAAAGACCCTCTTCCCATTGAACAACTCGCTCAAATTCT TGATGATTTTAAAATGATATTGGTTGTCAGGAATGATCTTAAGATGGGTAAAGGAAAGATTGCTGCTCAATGCAGTCATGCAACTTTGGGTCTCTATAAA AAGCTCCACAATCGAGCACCAAAGGCTTTGCATAGGTGGGAGATGTGTGCACAGCCAAAGGTTGTTGTCAAAATTGAATCTGAAGAAGATATGCTGGCTT TGCAAGTAAGTATTGTTTAGGGAAACATGGCGCTGATTTTGCTAAATTTTTGTTTAATATGTTTAAGTGCTGGATTAGATAACCAAGTTTGGTCCAAGGA GAAAGATATGAAATCACTTATCTTTTATGTTAATCATATAAATATTGGTTGGAAGTTAAGTTTTTATTAGTGTTCTGGTCAACTTTTGTATTTCAAAGCA AAAAGTGCAAGATAGGATCTGCGATCAGGAGTAAAATGGATATATATATATATATAGACACACACACATGTTACTTTTGATTCAACAGATAAGTACAAAT AGAAAGAAAGTAGATTTGGGGTCAGCTATGTTGTGTATAGGAACTGCCTAAGGCTTGTTTGTACACTCAATGCCAATGGACATAAAAGTGGGCTATTAGA GAAAATGTCCGTGCTCATAATACAAAGTTAGGCAGGAAAATTTGGGTTTTACTGAAGTGTAAAATACCTTCTGCATGCCTGAAATTTAGAAAATGAGTTT CTATTCTTACTGTCACCTGAAAATGTATAGGCTTTTAAGATTTTTTAAATGAGAGCTCTTGCATAGTGGTGTGTAATTTGGGTTATACATGATTAGTCAT TAGTGTGCATGGAGAGGAAGTGGAGGGAATTCAGGAAAGAAAAAATATTTGTTACCCCAAATCACTATAATATATAAATAGGTCCTGTAAATTTGTTAGG GTTAAAAGCTTATTTGAGGGCATTATATGATTTGTTTTTAGTCTGGAAACATGTCTTGAAAAACACAAATGAAGTTGTTTTGACTTTGGAGCTGTGAAAA AAGTAGAAGTGAGAGGCTTGGGAATTTGGGTTATAAACAACGAATGGCCAAGGACAGAGGATGTGTGCATAGCATAAAATTGTCAGCCAAAATGTTGATC TGTTCATGTTGGAACTTTGAACTCAAGTAAACGAAGGCAGTTACTTTGGCTAATCTTTTTTTATAAGTTTTAATAATATTTTAAGGATGTATGGTATTAA GTTAACTCTTTCATTTTAGCAAAAAGTAATAGCATGGAAGGTTTATTATGTGACAAGCAAACATATTCCTAGAATATTAAGTAGTTTAAACTATTTTTAT TTTGTCTACTTGGTTTATATACACTAATTTGATATATTGTTTGGTATATCTTTGTCTATGAATAAATTTGTCTACTTTGTCTTGTTATCTTCTTTCATCC TTCACATCAATGTTAACAAATTTATATTCACCTTGCTCTGAAATGCCTAATACTACATGTTTATCACCCATTTTACGATATCAAATTCTCTAATGTTAAT GTATAGTAACTCTCTCAGAAGTTGGTTTTGTTTTAGATATATTGTTATTTAATGTGTCAGGAAAGGGCTAAATCTCTGAAGTTACCCACCCATATCACCA TTGATGCTGGGAGAACGCAGATTGCTCCAAGTGAGTATTCGAAATTCTTCTAATTTGTAGCTGATTGATTTCTAGCATCTCTTACATAATTGAAATTTTC ACCATTGTTTGTGTTAATTTACTGCCTAGCAGTAACATAAAATTATTGTCTTGCACTCGATTTGAAGTATATTTGTCTAGATCTCGTATTATGCTGTGTC TGCAGGGGTCATGTGCACAGCTAGAATTTAAACTAGAGATAGTATTCCTCCTCCTAAAATAAGATGGCCATCTCATTCTCCTTTTTTGTTATCTATATTG AACCACAACCCATACTCGTAATTGATTGTTCATAGATACACTCTGAAGAAAAGGAAAGCTTAGTCTGTTCATTTTGGACTCTCTGTATGTTTGTTGTCCC CAATGAGAAAAAATAGTTCAATTTATGTATTGAAGTTGCTAGAAATGGGCTTTTCTTTCATCATTTGTGCCATATTCTTCTTTTTATAGGTCTAGTATAT AAATCTTCAGAGCAACGGCCGAACCATAATTCCACTAGGCCGGGTTGGCTACATGGATAGAATGACGCCATAATTCGCTATCATAAAAATGCTATATGAT GTGGTTATAAATGTTTGTTTACATTTAATGCTTATCACAATGTTTTTCTTTCTTTCCTCTATCAGATTCCAGAACAGTGATGGCAATTATGGGTAATACT CCTCTAGTAACATCTCTTATCAATTTAGCATTTCTTTCCGAAGTATAGTTTAAACTTATTCTGCTATTTTTTTGCAGGACCTGTTGAAGTGGTAAATGAT GTAACAGGTGGACTAAAACTACTATAGTTTTCTGTCCAACCAAGATGTGCTATTGTTTACTATGAACCTGAATATTCATGAAGGATGACATTGACAGATT GAAGTGTTGAACATTACTACATTAGAGGCCTCCTCAGGCCAAAATCCCCAATGTTCTTTCTGCATAATGTTTTGCAATTAATCTTATGTTGACATTTGAC AGTAATAATGATGATGATGATGATGTCTTTTCTTTGAAGATCCTAGCTGATAAAAGGGTAGAATCACGTGGACTAAATAGTTTATACATAACTTTGCAAT TCAGTTAATATGAAGTGTTATGGAGATGTATGAATTTTTTTGCCCATTAATAATAAAAATTGGACATCAACAAAAT
• Tissue: pods
• Gene name: LI_gene_157043;
• Additional information: details;

Expression of Ll_transcript_423641

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0.6
• PS3: 0.1
• PW1: 0.3
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_423641

• Blastp: Peptidyl-tRNA hydrolase 2, mitochondrial from Homo with 50% of identity
• Blastx: Peptidyl-tRNA hydrolase 2, mitochondrial from Homo with 61.04% of identity
• Eggnog: The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity)(COG1990)
• Kegg: Link to kegg annotations (51651)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413692.1)
• Pfam: Peptidyl-tRNA hydrolase PTH2 (PF01981.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;