Ll_transcript_423642

• Id Trinity: TRINITY_DN47966_c5_g1_i2
• Name Transcript: Ll_transcript_423642
• Sequence: CTCCTTCAAAATGAAATATTTAATCTTGATAAAAAAATAAAAAGAGGGAAGGTGAGAAAATAAAGCAGTGTGAAACCCTAGTAAGTTAATTGAATCGTGA AGTGAGTTGTGAATGGAACTAACATGGTTGAGTTTCATTCTTGTTGGGGCTTTCGGTTACTTCATCGGTTCTCATTATCCTTCTCGCTTTCTCCTTTCCT CACTTCGCTCTCTTCCTAAAGACAACAACTTCAATAACAAGAACAATTCTAAATCCAAATTCAAAGACCCTCTTCCCATTGAACAACTCGCTCAAATTCT TGATGATTTTAAAATGGTTGGTATTCATCAATTTTCATTCTTTTTCTTTCAACCCACTAGTTCAATTTTTCTGGGTTATTTCCAAAATTGTTCCTTTTTT ATTGCAGATATTGGTTGTCAGGAATGATCTTAAGATGGGTAAAGGAAAGATTGCTGCTCAATGCAGTCATGCAACTTTGGGTCTCTATAAAAAGCTCCAC AATCGAGCACCAAAGGCTTTGCATAGGTGGGAGATGTGTGCACAGCCAAAGGTTGTTGTCAAAATTGAATCTGAAGAAGATATGCTGGCTTTGCAAGTAA GTATTGTTTAGGGAAACATGGCGCTGATTTTGCTAAATTTTTGTTTAATATGTTTAAGTGCTGGATTAGATAACCAAGTTTGGTCCAAGGAGAAAGATAT GAAATCACTTATCTTTTATGTTAATCATATAAATATTGGTTGGAAGTTAAGTTTTTATTAGTGTTCTGGTCAACTTTTGTATTTCAAAGCAAAAAGTGCA AGATAGGATCTGCGATCAGGAGTAAAATGGATATATATATATATATAGACACACACACATGTTACTTTTGATTCAACAGATAAGTACAAATAGAAAGAAA GTAGATTTGGGGTCAGCTATGTTGTGTATAGGAACTGCCTAAGGCTTGTTTGTACACTCAATGCCAATGGACATAAAAGTGGGCTATTAGAGAAAATGTC CGTGCTCATAATACAAAGTTAGGCAGGAAAATTTGGGTTTTACTGAAGTGTAAAATACCTTCTGCATGCCTGAAATTTAGAAAATGAGTTTCTATTCTTA CTGTCACCTGAAAATGTATAGGCTTTTAAGATTTTTTAAATGAGAGCTCTTGCATAGTGGTGTGTAATTTGGGTTATACATGATTAGTCATTAGTGTGCA TGGAGAGGAAGTGGAGGGAATTCAGGAAAGAAAAAATATTTGTTACCCCAAATCACTATAATATATAAATAGGTCCTGTAAATTTGTTAGGGTTAAAAGC TTATTTGAGGGCATTATATGATTTGTTTTTAGTCTGGAAACATGTCTTGAAAAACACAAATGAAGTTGTTTTGACTTTGGAGCTGTGAAAAAAGTAGAAG TGAGAGGCTTGGGAATTTGGGTTATAAACAACGAATGGCCAAGGACAGAGGATGTGTGCATAGCATAAAATTGTCAGCCAAAATGTTGATCTGTTCATGT TGGAACTTTGAACTCAAGTAAACGAAGGCAGTTACTTTGGCTAATCTTTTTTTATAAGTTTTAATAATATTTTAAGGATGTATGGTATTAAGTTAACTCT TTCATTTTAGCAAAAAGTAATAGCATGGAAGGTTTATTATGTGACAAGCAAACATATTCCTAGAATATTAAGTAGTTTAAACTATTTTTATTTTGTCTAC TTGGTTTATATACACTAATTTGATATATTGTTTGGTATATCTTTGTCTATGAATAAATTTGTCTACTTTGTCTTGTTATCTTCTTTCATCCTTCACATCA ATGTTAACAAATTTATATTCACCTTGCTCTGAAATGCCTAATACTACATGTTTATCACCCATTTTACGATATCAAATTCTCTAATGTTAATGTATAGTAA CTCTCTCAGAAGTTGGTTTTGTTTTAGATATATTGTTATTTAATGTGTCAGGAAAGGGCTAAATCTCTGAAGTTACCCACCCATATCACCATTGATGCTG GGAGAACGCAGATTGCTCCAAGTGAGTATTCGAAATTCTTCTAATTTGTAGCTGATTGATTTCTAGCATCTCTTACATAATTGAAATTTTCACCATTGTT TGTGTTAATTTACTGCCTAGCAGTAACATAAAATTATTGTCTTGCACTCGATTTGAAGTATATTTGTCTAGATCTCGTATTATGCTGTGTCTGCAGGGGT CATGTGCACAGCTAGAATTTAAACTAGAGATAGTATTCCTCCTCCTAAAATAAGATGGCCATCTCATTCTCCTTTTTTGTTATCTATATTGAACCACAAC CCATACTCGTAATTGATTGTTCATAGATACACTCTGAAGAAAAGGAAAGCTTAGTCTGTTCATTTTGGACTCTCTGTATGTTTGTTGTCCCCAATGAGAA AAAATAGTTCAATTTATGTATTGAAGTTGCTAGAAATGGGCTTTTCTTTCATCATTTGTGCCATATTCTTCTTTTTATAGGTCTAGTATATAAATCTTCA GAGCAACGGCCGAACCATAATTCCACTAGGCCGGGTTGGCTACATGGATAGAATGACGCCATAATTCGCTATCATAAAAATGCTATATGATGTGGTTATA AATGTTTGTTTACATTTAATGCTTATCACAATGTTTTTCTTTCTTTCCTCTATCAGATTCCAGAACAGTGATGGCAATTATGGGTAATACTCCTCTAGTA ACATCTCTTATCAATTTAGCATTTCTTTCCGAAGTATAGTTTAAACTTATTCTGCTATTTTTTTGCAGGACCTGTTGAAGTGGTAAATGATGTAACAGGT GGACTAAAACTACTATAGTTTTCTGTCCAACCAAGATGTGCTATTGTTTACTATGAACCTGAATATTCATGAAGGATGACATTGACAGATTGAAGTGTTG AACATTACTACATTAGAGGCCTCCTCAGGCCAAAATCCCCAATGTTCTTTCTGCATAATGTTTTGCAATTAATCTTATGTTGACATTTGACAGTAATAAT GATGATGATGATGATGTCTTTTCTTTGAAGATCCTAGCTGATAAAAGGGTAGAATCACGTGGACTAAATAGTTTATACATAACTTTGCAATTCAGTTAAT ATGAAGTGTTATGGAGATGTATGAATTTTTTTGCCCATTAATAATAAAAATTGGACATCAACAAAAT
• Tissue: pods
• Gene name: LI_gene_157043;
• Additional information: details;

Expression of Ll_transcript_423642

FPKM

• PAB: 0.8
• PNAB: 0.5
• PS1: 0
• PS2: 0.1
• PS3: 0.6
• PW1: 0.2
• PW2: 0.6
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_423642

• Blastp: Peptidyl-tRNA hydrolase 2, mitochondrial from Homo with 64.52% of identity
• Blastx: Peptidyl-tRNA hydrolase 2, mitochondrial from Homo with 64.52% of identity
• Eggnog: The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity)(COG1990)
• Kegg: Link to kegg annotations (51651)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413692.1)
• Pfam: Peptidyl-tRNA hydrolase PTH2 (PF01981.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;