| Id Trinity | TRINITY_DN47966_c5_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_423646 |
| Sequence | CTCCTTCAAAATGAAATATTTAATCTTGATAAAAAAATAAAAAGAGGGAAGGTGAGAAAATAAAGCAGTGTGAAACCCTAGTAAGTTAATTGAATCGTGA AGTGAGTTGTGAATGGAACTAACATGGTTGAGTTTCATTCTTGTTGGGGCTTTCGGTTACTTCATCGGTTCTCATTATCCTTCTCGCTTTCTCCTTTCCT CACTTCGCTCTCTTCCTAAAGACAACAACTTCAATAACAAGAACAATTCTAAATCCAAATTCAAAGACCCTCTTCCCATTGAACAACTCGCTCAAATTCT TGATGATTTTAAAATGATATTGGTTGTCAGGAATGATCTTAAGATGGGTAAAGGAAAGATTGCTGCTCAATGCAGTCATGCAACTTTGGGTCTCTATAAA AAGCTCCACAATCGAGCACCAAAGGCTTTGCATAGGTGGGAGATGTGTGCACAGCCAAAGGTTGTTGTCAAAATTGAATCTGAAGAAGATATGCTGGCTT TGCAAGAAAGGGCTAAATCTCTGAAGTTACCCACCCATATCACCATTGATGCTGGGAGAACGCAGATTGCTCCAAATTCCAGAACAGTGATGGCAATTAT GGGTAATACTCCTCTAGTAACATCTCTTATCAATTTAGCATTTCTTTCCGAAGTATAGTTTAAACTTATTCTGCTATTTTTTTGCAGGACCTGTTGAAGT GGTAAATGATGTAACAGGTGGACTAAAACTACTATAGTTTTCTGTCCAACCAAGATGTGCTATTGTTTACTATGAACCTGAATATTCATGAAGGATGACA TTGACAGATTGAAGTGTTGAACATTACTACATTAGAGGCCTCCTCAGGCCAAAATCCCCAATGTTCTTTCTGCATAATGTTTTGCAATTAATCTTATGTT GACATTTGACAGTAATAATGATGATGATGATGATGTCTTTTCTTTGAAGATCCTAGCTGATAAAAGGGTAGAATCACGTGGACTAAATAGTTTATACATA ACTTTGCAATTCAGTTAATATGAAGTGTTATGGAGATGTATGAATTTTTTTGCCCATTAATAATAAAAATTGGACATCAACAAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_157043; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_423646
| Blastp | Peptidyl-tRNA hydrolase 2, mitochondrial from Homo with 50.76% of identity |
|---|---|
| Blastx | Peptidyl-tRNA hydrolase 2, mitochondrial from Homo with 58.72% of identity |
| Eggnog | The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity)(COG1990) |
| Kegg | Link to kegg annotations (51651) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413692.1) |
| Pfam | Peptidyl-tRNA hydrolase PTH2 (PF01981.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |