Ll_transcript_421948

• Id Trinity: TRINITY_DN47973_c3_g2_i5
• Name Transcript: Ll_transcript_421948
• Sequence: TACGATCATACTCCTACACACAATCTAAAGATAAATGTTGAGATTTTATCAAAATTTAAAATACATCTTTACTTTAAAATTTTGATTTCTCAAGTTTGAC TTATAATCACTTAGAAGCTTCCTCTGCCCTCAGGATTTGGGCAGTCGTCCAGAAGAAATCAACCTGAAGTAAACACAAGAGCCTCTCCCCACCACCATTT CTCAATTTTCAATAACTCTCTATCTTTCTATGTCCCTCTCTCCCACTTCCTCTATAGGGTTACTTCTTCAACAACCTCTAACAATGGAACAAGACGGCGT CGTTTCAAAACCCATCGCGGTTATCGCTTCCATATCGATGGCTTTGCTATACGTCGCCGTTTTATACGCTCCCACCTTGCTCCTTCGTCTCCCTCCTCCT TCTTCTTTCACCAACTACATGATCCGACGCTTCCTATGCGCCGTCGTTTCATCCATTATCTCCCTCTTGATCTCCGCCCTCATCCTCCCCGTGCAAACAA AGGAACTGTTTGGTGTTTATGGCATCCGAGTTGATCATATTTGGCAAGCAGTGATCTTTCCTCTTTCATTGACCTCTCTAATGTATGCCGGATATTTGTT CCACAAGTCTCTTTTGTTGCTGGATTCTTGGAGGGAGCACAGAAGTTCTGGCGGCAGCCTTTCATTTGCTTCTTGTAAATATTTCTCACAGTGTTTTCTT GCCTGGCTATCCGCTATTTCGTCAAATGTTTTGGTGTGGCGTAACTATGTTGTGGCACCCATTACTGAAGAGTTAGTGTTTAGGGCAGGCATGATACCTT TACTTCTATGTGGAGGATTTCGACCATACAGCGTCATACTTCTTTGCCCTATCTTCTTCAGCCTGGCACATTTAAATCATTTCATGGAGATTTACGCCAA GCAAAACTACAGAATAAAGAAGGCTGTTATGATTATTGGTCTTCAGCTTGGCTACACTGTTATCTTTGGATCATATGCATCTTTTCTTTTCATTCGAACA GGACATCTTATTTCTCCATTGGTTGCTCACATATTTTGTAATTTTATGGGACTGCCTGTACTCTTTTCACGGAGAAATGGTAAGCACATGAAGTTTCTTA TGTAGATTGAAATAATTATCCACTTCTATGGTTATAATATATCAAACTGCTTTTATTATTAACTCTTATTGTTTTCATTGCTACATTTTTGTTCTCTTTT GTTACAGTTAAAATACTGATGCTCTAAAGGTGTCATTGTTTTGATTTCTCATGTCCTCCATTTCTTGAATTATTCTCATCATACTGATGCTCTAGAGCTC AAGAATATAATGTCAGGGAGACCAAGAAAAACAATAACTGAAACAATTAGGAAAATATAGATTTTGTTAATGAACATAATTTATGATAGAGCATTATGAC GTCGTTTGATCCATTTAGCTGACTATACTTAGTGAGATTAAGGTTTGGTTGTTGTTATTGTGATAATAGATTTTGAGGTTTAGTTTATATCTTTGTCTCG ACCTCTGCTCAATTATCCTCTCTCATAGCTTCATAATAAGGCTCGTGGACTTAATCCCCTAGGCTTTGTCCAAATTTGTATATCTCCCTTGTTCTTATAA ATAAGGATTGAAGTGTTTCTCCTTCTCTCGTATAGCATCTTCTCATACCTCATAATTTTATTAAACAACTTTGTGAGTCAATTAATGTTCTATTCTCCTA GAACCTTCCAGACCTCAATAACTATATTATCCGATCCAATTGCTTTGTCATTCTTCATCCTTTTTAAAGCTTCTTTGACCTTCAACTCTCGAATTATATA AAAGGTATAATTTTGATTCTCCACTTTAGTTTTAGCCTATGAGAAATGCAAATTTTATGTTGGGTCGACCCTCATTTTTAAGTAAATCAAAGGCACCCTA AAACACTAAGCTCTTAGTAAATATTAAATAAGAAAATATGAAATTGTTGGAGTAAATAAAATATTTCATTTGAAATTACAACAAATTCTAACTGTCTGTT ACATTTGTGGAATTACATGGTTAATGACTTTATGGACATTTGACGCTTGTTGGAATTCACGCATAGATTACTGCATAGGCATATCATACGATATCTTGCA TAAATAGGTAAAAATTCTCTGTTTTCATTTTTAGTTATTATGTTGAGCCTCCATAAAATCACCCCCGCAGTGTAGTTGATACACAGATTCATCACATGTC TACCTTTTCTCTCATTACACTCTGCAGCACTAACATTGAATCAAATGCAAATTAGATCATTATTTGTAAGTTTGTTTGAGTGAAAGTATGTTTATTTTGA TATTTAATAATGATTAAAGTAGTATGTTGGTTAAATTGTACTCCCCTTTGCCACTATTAAGTTTATTGATCAAATATCCAATGGTTCCCTCCCCCCCAAG TGCGTTGGTGCATATGGTCACGTACCACCTTAATATGAAAGTACACTTCGTTTCTGCCTGAAGGATTTCATATTTGTTTCTTTTCCAGGGATAGTATGTA TAGCATTCATAATGGGATTCTTGGGCTTCTTGTGGCTTCTTTTCCCAATGACAGAGCCACATTTGTATAATGATACAATAGATAATTGCAGTTATTGGCA AGGACATTGCTCATGGAGCCAAGGAATAGAAAGGTCCTCTATGTAAAGGGGAGGGTGTTGACTAAGATTACATACATAGGTGAAGGAACCTCAAGCCCCA TGGACCTGCATTTTTTGAACCTATATTCATGTGTGATTTGAGGTGGTTCATAAAATGGAGCTATAGGTCAAACTCTATCTGAACTGCAGGTTGCTCTTTA TAAGAGAGACTTAAAGTACCTTGGTGGAAGTGGTGTCCAATGCATGGCCATATTAGTGGATGAAGCTTCACAAGGTGAAAGTAAGAACACTAGAGAGATG AAAGTTAAGGATTAAGATTGGAATCGGAATCCTCCTTCATATTAGAGATGAAGGAAAATGCAGTCTCATTCTTTGTGGCAATTCCTTTTTTTTGTTGCGA AACACTACAATATTCATTATAAAACAAATCAGAGGTAATAATATTGTTGGCCTTAAAATTGTTTTGAATTTTATTTTTCTCATAATCTATTCTCAGGGAT TTGGGTTTGCCGATCGGTTCGTCATTTGCCATGTGTAATGTCTTATGTATCCATTCTCGACATATTCCTAAATATTAATATCAATGGTCTCATTGAATAT TTTCATTGTTAGCCTTCCAATATGCATAACCTTTACCATTGAAGATTGGTGGCCTATTTATATAA
• Tissue: pods
• Gene name: LI_gene_157109;
• Additional information: details;

Expression of Ll_transcript_421948

FPKM

• PAB: 0.5
• PNAB: 0.1
• PS1: 0.3
• PS2: 0.2
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_421948

• Blastp: CAAX prenyl protease 2 from Arabidopsis with 56.78% of identity
• Blastx: CAAX prenyl protease 2 from Arabidopsis with 56.78% of identity
• Eggnog: RCE1 homolog, prenyl protein protease (S. cerevisiae)(ENOG410YPVA)
• Kegg: Link to kegg annotations (AT2G36305)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431497.1)
• Pfam: CAAX protease self-immunity (PF02517.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;