| Id Trinity | TRINITY_DN47973_c3_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_421952 |
| Sequence | TCCCTCTCTCCCACTTCCTCTATAGGGTTACTTCTTCAACAACCTCTAACAATGGAACAAGACGGCGTCGTTTCAAAACCCATCGCGGTTATCGCTTCCA TATCGATGGCTTTGCTATACGTCGCCGTTTTATACGCTCCCACCTTGCTCCTTCGTCTCCCTCCTCCTTCTTCTTTCACCAACTACATGATCCGACGCTT CCTATGCGCCGTCGTTTCATCCATTATCTCCCTCTTGATCTCCGCCCTCATCCTCCCCGTGCAAACAAAGGAACTGTTTGGTGTTTATGGCATCCGAGTT GATCATATTGTGAGTATCGCGATCACATTCACCGGTTCAATGCATTATTAAAAGACTAAATTCCCAAATTCGTTATGAAGGAAAAAATGCCTCATTTAGT ACTTTGATAGAGTGTTTTAAATTACGGTTGTGAGTGCGATAACAACTGCAGTTACTGTGATTGTGGTCATTGCGGCTCTTGTGGATTGCGGCCATAGCGT GGCAAGCAGTGATCTTTCCTCTTTCATTGACCTCTCTAATGTATGCCGGATATTTGTTCCACAAGTCTCTTTTGTTGCTGGATTCTTGGAGGGAGCACAG AAGTTCTGGCGGCAGCCTTTCATTTGCTTCTTGTAAATATTTCTCACAGTGTTTTCTTGCCTGGCTATCCGCTATTTCGTCAAATGTTTTGGTGTGGCGT AACTATGTTGTGGCACCCATTACTGAAGAGTTAGTGTTTAGGGCAGGCATGATACCTTTACTTCTATGTGGAGGATTTCGACCATACAGCGTCATACTTC TTTGCCCTATCTTCTTCAGCCTGGCACATTTAAATCATTTCATGGAGATTTACGCCAAGCAAAACTACAGAATAAAGAAGGCTGTTATGATTATTGGTCT TCAGCTTGGCTACACTGTTATCTTTGGATCATATGCATCTTTTCTTTTCATTCGAACAGGACATCTTATTTCTCCATTGGTTGCTCACATATTTTGTAAT TTTATGGGACTGCCTGTACTCTTTTCACGGAGAAATGGTAAGCACATGAAGTTTCTTATGTAGATTGAAATAATTATCCACTTCTATGGTTATAATATAT CAAACTGCTTTTATTATTAACTCTTATTGTTTTCATTGCTACATTTTTGTTCTCTTTTGTTACAGTTAAAATACTGATGCTCTAAAGGTGTCATTGTTTT GATTTCTCATGTCCTCCATTTCTTGAATTATTCTCATCATACTGATGCTCTAGAGCTCAAGAATATAATGTCAGGGAGACCAAGAAAAACAATAACTGAA ACAATTAGGAAAATATAGATTTTGTTAATGAACATAATTTATGATAGAGCATTATGACGTCGTTTGATCCATTTAGCTGACTATACTTAGTGAGATTAAG GTTTGGTTGTTGTTATTGTGATAATAGATTTTGAGGTTTAGTTTATATCTTTGTCTCGACCTCTGCTCAATTATCCTCTCTCATAGCTTCATAATAAGGC TCGTGGACTTAATCCCCTAGGCTTTGTCCAAATTTGTATATCTCCCTTGTTCTTATAAATAAGGATTGAAGTGTTTCTCCTTCTCTCGTATAGCATCTTC TCATACCTCATAATTTTATTAAACAACTTTGTGAGTCAATTAATGTTCTATTCTCCTAGAACCTTCCAGACCTCAATAACTATATTATCCGATCCAATTG CTTTGTCATTCTTCATCCTTTTTAAAGCTTCTTTGACCTTCAACTCTCGAATTATATAAAAGGTATAATTTTGATTCTCCACTTTAGTTTTAGCCTATGA GAAATGCAAATTTTATGTTGGGTCGACCCTCATTTTTAAGTAAATCAAAGGCACCCTAAAACACTAAGCTCTTAGTAAATATTAAATAAGAAAATATGAA ATTGTTGGAGTAAATAAAATATTTCATTTGAAATTACAACAAATTCTAACTGTCTGTTACATTTGTGGAATTACATGGTTAATGACTTTATGGACATTTG ACGCTTGTTGGAATTCACGCATAGATTACTGCATAGGCATATCATACGATATCTTGCATAAATAGGTAAAAATTCTCTGTTTTCATTTTTAGTTATTATG TTGAGCCTCCATAAAATCACCCCCGCAGTGTAGTTGATACACAGATTCATCACATGTCTACCTTTTCTCTCATTACACTCTGCAGCACTAACATTGAATC AAATGCAAATTAGATCATTATTTGTAAGTTTGTTTGAGTGAAAGTATGTTTATTTTGATATTTAATAATGATTAAAGTAGTATGTTGGTTAAATTGTACT CCCCTTTGCCACTATTAAGTTTATTGATCAAATATCCAATGGTTCCCTCCCCCCCAAGTGCGTTGGTGCATATGGTCACGTACCACCTTAATATGAAAGT ACACTTCGTTTCTGCCTGAAGGATTTCATATTTGTTTCTTTTCCAGGGATAGTATGTATAGCATTCATAATGGGATTCTTGGGCTTCTTGTGGCTTCTTT TCCCAATGACAGAGCCACATTTGTATAATGATACAATAGATAATTGCAGTTATTGGCAAGGACATTGCTCATGGAGCCAAGGAATAGAAAGGTCCTCTAT GTAAAGGGGAGGGTGTTGACTAAGGTAGAGAGAATGGATTCTTCGATTACTATTTATTTATCCTTTTTTTTATATATTCAAGCTATCAGAATTTTATTTA TTCCATTTAGCTTCCTTTATTATTTAAGAAATTTATTTCATTTGTATAATTGGTGCATGTTCATTGATTTTGCTGCAAACTGCCAAATGCTAAAAAATGG CTAAAAGATGGAGAACTAGATAGGGCTATATGCCCACATTAATAACATAAGGTGTCTATATTATACAATTGTAAATTTATATATAATTACTAATTATATA TGTGTTGTCCGATCTGATACGACGGTTTTACCAATTGGACCTTATAGAACACCTCTTTCAGCTTGATCTCCTATTTGTCTTCCACAACGTTGGTTTCAGA TTACATACATAGGTGAAGGAACCTCAAGCCCCATGGACCTGCATTTTTTGAACCTATATTCATGTGTGATTTGAGGTGGTTCATAAAATGGAGCTATAGG TCAAACTCTATCTGAACTGCAGGTTGCTCTTTATAAGAGAGACTTAAAGTACCTTGGTGGAAGTGGTGTCCAATGCATGGCCATATTAGTGGATGAAGCT TCACAAGGTGAAAGTAAGAACACTAGAGAGATGAAAGTTAAGGATTAAGATTGGAATCGGAATCCTCCTTCATATTAGAGATGAAGGAAAATGCAGTCTC ATTCTTTGTGGCAATTCCTTTTTTTTGTTGCGAAACACTACAATATTCATTATAAAACAAATCAGAGGTAATAATATTGTTGGCCTTAAAATTGTTTTGA ATTTTATTTTTCTCATAATCTATTCTCAGGGATTTGGGTTTGCCGATCGGTTCGTCATTTGCCATGTGTAATGTCTTATGTATCCATTCTCGACATATTC CTAAATATTAATATCAATGGTCTCATTGAATATTTTCATTGTTAGCCTTCCAATATGCATAACCTTTACCATTGAAGATTGGTGGCCTATTTATATAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_157109; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_421952
| Blastp | CAAX prenyl protease 2 from Arabidopsis with 60% of identity |
|---|---|
| Blastx | CAAX prenyl protease 2 from Arabidopsis with 60.67% of identity |
| Eggnog | RCE1 homolog, prenyl protein protease (S. cerevisiae)(ENOG410YPVA) |
| Kegg | Link to kegg annotations (AT2G36305) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431497.1) |
| Pfam | CAAX protease self-immunity (PF02517.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |