| Id Trinity | TRINITY_DN47975_c1_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_423761 |
| Sequence | AATCATAATTTCTGTGACAGAGGACACACCTTTTTCTCTTAAACGTTTTCCCCTTTCTCTTCTACTTTTAAAAGAAGCTTAAACACCTTGCAATATGCAC TTCATGATCATTTCAGAGAGTATTACTATGTTTGGAAGATATTCATGCAAGCTTGTATCTTGTCAAATGCGACGTGGATTTGAATAGATCCAACCACGAA CAAGGAGAAAAGCAAACAAAAATGACGAAGTTCTGCAATGGGATATGTTTATTCTTCGTGTTAATGTGTGTCATTTGGGCTCCGATGCTGATGTACAGCA GCGGTAACCCAACAAACATCGCGAATCCAATCAAAGATGCCAGTGCTCGGCTTGATATAAATACAGTAAGTGGAAGGTTAACATTGTTTGAGACAACTTT GTGTGAGAAGATACCTTGGGAAAAGCTTGTAGCACGAACAAGTCTAGATCCTGAGGGTTATCTCAATGCATACAATGAGAAAGACATTCAATTGATTTGC TGCCAACCGGATGCAAGTACATCGTGGCTTGTGCCACCAGTTGTACAAGCCAGATTTATAAAGTCCCTTAGGCGGGACATGGAAATTACTTTCTCCTGGC AATTTACCAGAGATAGGCCTAAAGGAAAGGAATTAGTGAAATATGAATTAACCATAGAGGACCAGGATCTTCCAGAATCTTCAGAAGTTATTGAAGTTTT TAATGGCACTTCCAATAGCTTCACAGTATTCAATATATACCCTAGATATTTTCGGGTCACGGGCTCTGGTGATGTGCGGTCTCTTGAACAGTCGGTGGAG CTGGTTAATGGGGATCTTGTTCTCAACCGTGGAAATCCAGAGTGGTGGTCATTTTATGATACTGATACCTCGGACGCACATGGATGTGGAGAGTTCCCAG GACCAATGGCTATAATCGTATCTGAAGAAACTCCTCAGGGCATTATTGGTGAAACTCTCAGCAAGTTCAGCATCTGGGGACTGTATATTACCTTTGTTCT TGCTGTTGGACGCTTTATCAGATTGCAATGTTCCGACTTGCGAATGAGAATTCCTTACGAGAATCTTCCTTCTTGTGACAGATTGATGGCAATATGTGAA GATATATATGCTGCAAGAGCAGAAGGTGAGCTTGAAGTTGAAGAGGTTCTATTTTGGACACTTGTCAAGATTTACCGATCTCCGCATATGCTGTTAGAGT ATACTCAGCCTGATTAAATTCTTTGAAGATTTGGAAAATATTCAATCTCCTGTTACTGTCTCATCTTGCATGATTATGATGTTTTCCATCGAAGACCAAA TGTAAAGGTTGCTCAACTGTATGAATCTCAAGTTCTATCTTTTACTTGGTTTTGATTCTGAGACTTTGTATGTTATTCCAAAAAAAGGAGATTTGTCTCG TTAACATCAAAATTGGGAAAGTATATGGTGTTTAATGTAAACTTTATAATGGTTAAACCCTATATTCTCTCACTAATTTATACACTAGTTCTTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_157132; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_423761
| Blastp | Piezo-type mechanosensitive ion channel homolog from Arabidopsis with 66.07% of identity |
|---|---|
| Blastx | Piezo-type mechanosensitive ion channel homolog from Arabidopsis with 66.58% of identity |
| Eggnog | Piezo-type mechanosensitive ion channel component(ENOG410YVF6) |
| Kegg | Link to kegg annotations (AT2G48060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423186.1) |
| Pfam | Piezo non-specific cation channel, R-Ras-binding domain (PF12166.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |