Ll_transcript_423508

• Id Trinity: TRINITY_DN47978_c0_g1_i1
• Name Transcript: Ll_transcript_423508
• Sequence: AAAGACTCAACATTACTTATGTCAATGTCCTTAGTGAGAGAGACACAAACTTTTATAGAGAGAGAAAGTGGAGAGAGAAACACTGTACACCGGTTTTCAG CTCCGGCGAGTAATTTCCGGTGACCCTCGCCAGCGTTTACCGTCAATTGTTTTTTTCCTCGTTTTACATCAAAGCTCACAGAAACAAAAAAAACAGTTCC TTGGTTTCTAGGGTTTGGTTTACACTTCACTTTACTCTTGCTATTTTGGCGACTTTTCTCCATTTCCCAATGCCATTGTTTCCTCTTTTTTCTAAACTCT CTTCTCTGATTCATTCCACCTTCAAATATAACCGTTACCACAATAACCCTTTTTTGTTTGGTTCTAGAATGAGCTAACTTTGAAGTTGGGTTTCTAAGTT TCAACCGTTTCGTTTTTACTGAGTAAATTCGGAGTCTTTTATTCCCCTGTGTTGTTTTTCTGAACTCAATTTCAGATGGGTATCTAGAGTTAGAAAAATG CTTGCATTTTCAAACATGAGAGCTATATTTCTCTGCTTGCTATTTTTGCTTTTTGTTCTAGTGGTTGCTGCAACTGCAGTGAACCCGTCACTGAACGACG ACGTTTTGGGGCTTATTGTGTTCAAAGCTGACTTACAAGATCCCAGTGGAAAGCTTGCATCGTGGAATGAAGACGACGAGAGCGCGTGTGGTGGTAATTG GGTTGGTGTGAAGTGCAACCCTAGATCCAACAGGGTCACTGAGCTTAACCTTGATGGGTTCTTTCTAAATGGAAAGATTGGTAGAGGTTTGTTAAGGTTA CAGTTTCTAAGAAAGCTTTCTCTTTCGAGGAATAATCTTACTGGGGGCATTAGCCCCAACATTGCTCGAATTGATAACCTTCGCGTCGTCGATTTGAGTG ATAATAATCTTTCAGGGGAAGTTCCTGATGAGTTTTTCAAACAATGTGGGTCCCTCAGGATTGTTTCTCTTGCTAGGAACAAGTTTTCCGGGGAGATTCC ACCTAGTTTGGGCTCATGTTCAGCTCTTGCTTCTATTGACCTTTCATTTAACATGTTTTCGGGCTCCGTTCCTTCGGGGATTTGGGCTTCCAGTGGACTC AGGTCTCTGGATTTGTCTGGTAACTTGTTGGAGGGTGAGATTCCAAAAGGGGTTGATGCAATGAAGAATTTGAGAAGCATTAGTTTGGCAAAGAATCAGT TTTCAGGAGAGGTTCCAGCTGGGTTCGGAAGTTGCTTGCTTTTGAGGTCTATTGATTTCAGTGATAATTCTCTTTCTGGTAGCATACCTGGGGATTTGAA GGAACTCACATTGTGTAGTTACTTCAATTTGAGTGGAAATTCTTTCTCAGGAGAGATTCCTGAGTGGATTGAAGAAATGGAAGGCGTTCAGACATTGGAC TTATCTCGGAATGGATTTTCTGGTCAGGTGCCGGATTCTATAGGAAACCTTCCATCCTTGAAGATGTTAAATTTGTCTGCAAATGGACTCACTGGTAATC TGCCAAGGTCGATGGCAAATTTGACAAACCTTTTGGCATTGGATGTCAGCCAGAATTCAATGTCTGGAGCTCTTCCATCATGGATTTTCAAGTCAGACGT GGATAAAGTTTCAGTATCAGAAAACAGACTGACCGGTGTCATGAAAAGCACTTTCTATTCCTTGGCTGAAGTTACTATTCAAAGTATTCAAGTTTTGGAT TTATCTGACAATGCATTTTCCGGTGAAATCACATCTGCTATTGTGGGTTTAAGCAGCTTGCAGTTTTTAAACTTATCAAATAACTCTCTTGGAGGCCATA TACCAGCTGCAATTGGTGAATTAAAGACATTAGAGGGTTTTGATTTGAGTTCTAATAACTTAAGCGGGCCCATACCTTGGGAAATAGGAGGAGCCATGTC GATGAAGGAACTGAGATTGGAAAAGAACTCTCTTGTTGGGAAAATTCCATCGTCAATTGAAAACTGCTCGTCATTATCCACATTGGTTTTATCCCAGAAC AGGCTGAGCGGGCCGATACCTGAAGCACTTGCTAAACTTACCAACTTGCAAAATGTGGACTTATCATTGAACAGTTTTTCTGGAAACCTGCCTAAGCAAT TGGCCAATCTTCCCAATCTTCATTCCTTTAATTTATCTCACAACAACATTCAAGGTGAACTGCCTGGTGGCGGCTTCTTTAATACCATCCCAACTTCATC TGTTGCTGGCAATCCATCTCTTTGTGGCGCTGTAGTGGACAAATCTTGCCCTGCTGTTCTCCCAAAGCCTATTGTTCTAAATCCCAACACTACTACCGAC TCTGGCTCAGGTTCACTGCCTCCAGCTTTAGGTCACAAAAGAATCATTCTCAGCATTTCTGCGCTCATTGCTATTGGCGCAGCTGCTGTCATTGTAATTG GTGTCATTGGCATCACTGTTCTCAATCTTCATGTTCGATCCTCTGCTGAGAGATCTGCTGCTGCCCTCACATTTTCTGCAGGCGATGACTTTAGCCAATC CCCAACTACAGATGCCAACTCTGGCAAGCTTGTCATGTTTTCAGGTGAGCCTGAGTTCAGTTCCGGAGCACATGCTTTGCTTAATAAGGATTGTGAACTT GGGCGTGGAGGGTTTGGGGCAGTGTACCAAACGGTTCTTAGAGATGGGCGTTCAGTAGCTATAAAGAAGCTCACTGTATCAAGCCTTGTCAAATCTCAAG AGGATTTTGAAAGAGAAGTGAAGAAATTAGGAAAAGTCAGACATCAAAATCTTGTGGAACTTGAAGGTTATTATTGGACTCCATCGCTGCAGCTCCTCAT ATATGAGTATGTCTCCGGTGGCAGTCTGTATAAGCATCTCCATGAAGGATCAGGTGGAAACTTCCTCTCATGGAACGAGAGGTTTAATGTGATTCTCGGG ACTGCAAAGGCATTGGCTCACTTGCACCAGTCAAATGTTATTCACTACAACATTAAGTCAACAAATGTCCTTATTGATAGCTATGGCGAACCTAAAGTAG GGGACTACGGTCTAGCAAGGCTGTTACCAATGCTTGATCGATACGTCTTGAGCAGCAAAATTCAAAGCGCACTTGGCTACATGGCACCAGAATTTGCCTG CAAAACAGTGAAAATTACCGAGAAATGTGATATTTATGGGTTCGGAGTTTTGGTTTTAGAGATTGTTACGGGGAAGCGGCCTGTTGAGTATATGGAGGAT GATGTGGTGGTACTTTGTGACATGGTGAGAGGAGCTTTGGAAGAAGGCAGGGTTGAGGAATGTATTGATGAGAAGCTGAAAGGGAAGTTCCCAGCAGAGG AGGCTATTCCTGTGATAAAGCTTGGCTTGATATGCACTTCACAAGTTCCATCTAATAGGCCTGACATGGGAGAGGTAGTTAATATATTGGAGCTTATAAG ATGCCCCTCAGAAGGACAAGAGGAGTTGGGATAAGATAACTTGCATTTTTCCATGACTAAGATGATAGGCAATGGGTTATCCGGCGACGAAGAATCCGGT TTTATTAATTGTTGAAATTAGTTTCTAGCTTGTTTTTAATATTTCTATGTATGCTGTTGCTACCCCTAGGATGCCAGATTCTTTTTCACCGGGTTTCATT TTGTGACCCCTTTGAATATTGTTGTTCAATTACTGATATTTCATATTTCAGTTTGTTTCTTTTGGTGTCTCACTTACTGTTTGGACAGCTTTTTACCTTT TGTATGTGAAGGAATGATGATATTTATATGCTATGTATGAGGTTTATGCAAGAGCACAAGCAAGGGGGAAATGTAATAGTGATTCTGACAACCTTTTTGT TGTGTTTCTCCTCTCCCCTTTTTCCTTATTCTCATGTTTAGTAGTGACTAATGAGAGGAATGCTTTAATATGTTAATTGCATCTTGTAATTTGAGTTATG ATAGTTATTTAGGTTGGTTGTAGGTGAAGAATTCAACTAGCTAGGAGCACATGCAAGACCC
• Tissue: pods
• Gene name: LI_gene_157149;
• Additional information: details;

Expression of Ll_transcript_423508

FPKM

• PAB: 3.5
• PNAB: 56.9
• PS1: 53.5
• PS2: 22.3
• PS3: 39.7
• PW1: 21.2
• PW2: 9.8
• PW3: 4.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_423508

• Blastp: Probable LRR receptor-like serine/threonine-protein kinase IRK from Arabidopsis with 67.73% of identity
• Blastx: Probable LRR receptor-like serine/threonine-protein kinase IRK from Arabidopsis with 68.55% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT3G56370)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416879.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;