| Id Trinity | TRINITY_DN47978_c1_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_423519 |
| Sequence | TCTGATTCTTGATCAAGCCTTGGCCTGGCAGAGATCTGGTCTCATTGTGAGGCCAACTGTTCAATTTAGTGTGTGTCCTACTTTTGGTGGAAGCAATCCG GGGTTGCGGGCAGAACTCATTCATTCAGCTAAAGAGAAACTTAATACGATTTGCGGTTGTGCCTTGAAGACGTGTCCTTTTGCCTTTGCATCAATATCTG GGAGGAGACACTCGCAAAAGCTTTACAGATCACTTATATGCTGCTCTTAACAGAAAAGGCATTATAGTTTTCAGGGATGACGAACAACTCCTTAGAGGAG AAGTTATTTCGCAACAACTTCTTCATGCAATTCAACAATCTCTCACCTCAGTTGTTGTTATCTCCCCAGATTATGCTTCTTCTACATGGTGCTTGGAGGA ACTTCACAACATCCTTGAATCCACAACAGTGTTGGGTCGCAAAGCTTTTCCAGTTTTCTATGGTGTAGATCCATCTCATGTTAGACATCAAAGTGGAAGT GTTGCAGAATCATTCAGGAAACATGAACAAAGGTTTTCTGGTGACATGGATAAGGTGCAAAGATGGAGAGATGCTTTGAGAGGAGTTGCCAATTTATCTG GAAGGGATTCCAAAGACAGGCAAGAAACAGAGCTCATTGAAGATATTGTTGAAGACGTGTGGATAAATTTGCAACAGAAGTTGCCATCAGAGAATGATGG ACTAGCTGGACATCTTTCAAGGATAAGAGAACTAGATTCACTTTTGAGTATAGAATCATTGGATGTTCGCTTCATAGGAATATGGGGTATGGGTGGAATA GGAAAGACAACTCTTGCTAGAGTTGTTTTTGACAAAATCCGCGACAACTTTGAAATTCCCTGCTTTCTTCATAATGTTAAAGAGGTTTCTAAAACACCAG ATGGGTTGGTTTGCTTACAAAGAAAACTTCTTTCTCCCCTAAAAATAAGAAACCTTGAAATTGATGATTTGTATGATGGAAAGAAGAAAATCAGAAACCT TTTATGCAACAAAAAGGTTCTTCTAGTCCTTGACAACATTAGTTCTTTAAGCCAACTAGAGAATTTGGCTAAAAATCAAGAGTGGTTTGGTGTAGGCAGC AGAGTAATAGTGACAACAAGGGATATGCACTTGCTGGTATCACATGGAGAATGTGAGAACTATGAGATGGAAATCTTAAAGGAAAGTGATTCTTTTCAAC TCTTTAGTCAAAAAGCTTTCAAAAGTGATAAACCTCCAGAATGTTATTTAGAGCTAACTAAAAGTATTCTCCAATATGCTGGAGGTCTTCCTTTGGCACT TGAAGTATTGGGTTCTTTTCTTTGTGGGAGAAAACTCTCTGAGTGGGAGGGTGCTTTGGCAAAGATAAAACAAGTTCCGCCGGATGAGATTTGGAAGACA CTAAGAGTAAGTTATGATGAACTGGAAGATGCAGAAAAGGATATGTTTCTAGACATTGCATTCTTCTTTGTGGGACAGTTGGAATTAGAACAAAAATTGA AAGACTGTGGTCATCGTCCAACAATAGGATTAAGTCTTCTTAGTGAGAAATCATTGGTAACTTGCCGAAATGGAACATCGGAAATGCATGATTTGCTTCA GGAAATGGGTAAAAAGGTCGTTTTTCAAGAATCTCCCAATGATGCAAGCAGACGCAGTAGGCTGTGCTCTTTAGAAGAAGTTAATCAAGTATTGAGAAAA GCTAAGGGGACAGAATGCATTAAAGGAATAATTGTGAAGTCAAGTGACCCATGTGAAGAACATTGGGACCCTGAAGCTTTCTCAAAGATGTATAATCTTA AAGTACTGGTCATTTTGTGCGATTTGTACCTCCCCCTTGGCCTCAAATGTCTCTCTAGTTCGTTAAAAATCCTTGAATGGGAAAGTTGTTCTTTGCGGGA GCTACCACTTGGCTTGCCACTTGATGAACTTGTTCACTTGAAAATGCATTGCAGCAAACTTAAACAACTTTGGAATGGAACTCAAATTTTCAGAGAGCTA AAATCAATTGATCTCAGTGATTCCGGAGATCTAATTCAAACTCCAAATATTTCTGAGGTTCCATGTCTTGAGAGTTTAGTTTTGAAAGGTTGTAAAAATC TTGTTGAGGTTCATCAATCTGTTGCAAAGCACAAGAATGTTGCTATAATAGACCTGGAAGGTTGCATCAGTCTTAAGACCCTGCCAAGAAAATTGGAGAT GAATGCTTTGGAGAAGTTCATTCTCTCTGGCTGCTCACAAATTAAAAAGCTTCCCGAATTCGGGGAGAGTATGGAATGTCTATCTATGCTTAATTTAAGA GATTGCACAAGTCTTGTTTGTCTTCCACAGAGTATTCAAAACATGAAATCCTTTAGAGATCTCAATATCCATGGTTGCTCAAAATTGTTTAAGCTGTCAA ACAATTCAAATGAGAATAATGTTATGGAGGAAATTGATGAGACTGAAACAGCTAAGAGAGAAGTGCATTCATCTGCCATTGATTTAAAATCTCTGAACAT GTTATTAAACAAAGGATATGTTTGGTTAATTAGCAACTCATGGAGCTTTTCTCTCCTTACTGAGAAAGTGTTTGATTTCGTAAAGTATCCAGTCAGCGTC GACTCGAAGTCGCCTTCCCTCTCAAGTTTCCCTCTGTTGAAGAAATTGGATATGGGTTGTTGTAATCTCAGTGATGGACCAATTATAGATCATATTGGAC ATTTAACATCACTTGAAGTATTATATTTAGCTGGGAACAACTTTGTTGACCTTACAGCAAGCATTGGTAATCTTTCTCGGCTACAACGCCTTGGTTTATA TAAATGCCGAAGACTTAGGACACTTCCTGAGCTTCCAGCCAGTGTATGCCAGCTACTTATGAACGACTGCACTCAACTGGAACCTATGTTATTCGACACA CACAGAATACGGAAAATATTTGAGGCAAATAGATGGAGCCTGACACGTGAATTGTGGTTCCTGATTCCAGGGAGCGAAATCCCGCCATGGTTTGAGCATC AAGATTATTTTACCCTGAAACCAAGTTTAGCGCCTTTCGATTATCATGAGGAGTATGCTTTTATTGTTTCTACAATAGTAAACATCCCTGACTATTGCCT TTCAAGTGACTGGATAGGAATTTTTGTATGCTTTTTACTGGAAAGTGGTTTAAAGGCAGACCCACACAGACATATCCATCGAAGTCCGGTCACGATCGGA TGGTCTTTTAAAGATCCCGATACAGAAATGGTTTACCCCTTACGCTTCACTAAACGCCGTTGGACACATTTCAAAGGCAAACACCTGTTTGTTACTACTT TTGGAAGTGATCATAGAATATACAAGCACTACTTAACTTGTGGCAAAAGCAAAGTGCAGTTGATATTTTGTGGTGAGAATATTTGCAAGTGTGGGAAGCT AAAACTGGAAAACTGTGGGATTCGTGTGATTTGTAAGGAAGATGGTGTGTCCCGTAGAGGCGAGGAAACAAGTGAATTTGAGGTGCCTTCTACTTCAGTT GAATCTGGTGTTCACAAGCAATCAAGAATAACCGAAATTACAGATGAATACGAAGGAGATACGAACCAATCACATATTACCTCATGAATAACACAATATT TTTAAAAATAACATTCTGATTGGTTCAGACAAATAATGAGATACCTTTCGGGACTCTCTGTCCTTAATTCATAGCGTATAATATATGTGAGCATCTACAT CTTCTTTTGTTTTGTTGTCATGATTATTAGTTCATGTGAGTTACAGTTGGTGCAGACATTAATTTGGTATGTACCAATAGATTGACTCTTCAAAGTAAAA AGGTATAATGCATATTATTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_157150; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_423519
| Blastp | TMV resistance protein N from Nicotiana with 34.76% of identity |
|---|---|
| Blastx | TMV resistance protein N from Nicotiana with 36.19% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459892.1) |
| Pfam | NB-ARC domain (PF00931.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |