Ll_transcript_423524

• Id Trinity: TRINITY_DN47978_c1_g1_i16
• Name Transcript: Ll_transcript_423524
• Sequence: TCTGATTCTTGATCAAGCCTTGGCCTGGCAGAGATCTGGTCTCATTGTGAGGCCAACTGTTCAATTTAGTGTGTGTCCTACTTTTGGTGGAAGCAATCCG GGGTTGCGGGCAGAACTCATTCATTCAGCTAAAGAGAAACTTAATACGATTTGCGGTTGTGCCTTGAAGACGTGTCCTTTTGCCTTTGCATCAATATCTA TTATGCTTCTTCTACATGGTGCTTGGAGGAACTTCACAACATCCTTGAATCCACAACAGTGTTGGGTCGCAAAGCTTTTCCAGTTTTCTATGGTGTAGAT CCATCTCATGTTAGACATCAAAGTGGAAGTGTTGCAGAATCATTCAGGAAACATGAACAAAGGTTTTCTGGTGACATGGATAAGGTGCAAAGATGGAGAG ATGCTTTGAGAGGAGTTGCCAATTTATCTGGAAGGGATTCCAAAGACAGGCAAGAAACAGAGCTCATTGAAGATATTGTTGAAGACGTGTGGATAAATTT GCAACAGAAGTTGCCATCAGAGAATGATGGACTAGCTGGACATCTTTCAAGGATAAGAGAACTAGATTCACTTTTGAGTATAGAATCATTGGATGTTCGC TTCATAGGAATATGGGGTATGGGTGGAATAGGAAAGACAACTCTTGCTAGAGTTGTTTTTGACAAAATCCGCGACAACTTTGAAATTCCCTGCTTTCTTC ATAATGTTAAAGAGGTTTCTAAAACACCAGATGGGTTGGTTTGCTTACAAAGAAAACTTCTTTCTCCCCTAAAAATAAGAAACCTTGAAATTGATGATTT GTATGATGGAAAGAAGAAAATCAGAAACCTTTTATGCAACAAAAAGGTTCTTCTAGTCCTTGACAACATTAGTTCTTTAAGCCAACTAGAGAATTTGGCT AAAAATCAAGAGTGGTTTGGTGTAGGCAGCAGAGTAATAGTGACAACAAGGGATATGCACTTGCTGGTATCACATGGAGAATGTGAGAACTATGAGATGG AAATCTTAAAGGAAAGTGATTCTTTTCAACTCTTTAGTCAAAAAGCTTTCAAAAGTGATAAACCTCCAGAATGTTATTTAGAGCTAACTAAAAGTATTCT CCAATATGCTGGAGGTCTTCCTTTGGCACTTGAAGTATTGGGTTCTTTTCTTTGTGGGAGAAAACTCTCTGAGTGGGAGGGTGCTTTGGCAAAGATAAAA CAAGTTCCGCCGGATGAGATTTGGAAGACACTAAGAGTAAGTTATGATGAACTGGAAGATGCAGAAAAGGATATGTTTCTAGACATTGCATTCTTCTTTG TGGGACAGTTGGAATTAGAACAAAAATTGAAAGACTGTGGTCATCGTCCAACAATAGGATTAAGTCTTCTTAGTGAGAAATCATTGGTAACTTGCCGAAA TGGAACATCGGAAATGCATGATTTGCTTCAGGAAATGGGTAAAAAGGTCGTTTTTCAAGAATCTCCCAATGATGCAAGCAGACGCAGTAGGCTGTGCTCT TTAGAAGAAGTTAATCAAGTATTGAGAAAAGCTAAGGGGACAGAATGCATTAAAGGAATAATTGTGAAGTCAAGTGACCCATGTGAAGAACATTGGGACC CTGAAGCTTTCTCAAAGATGTATAATCTTAAAGTACTGGTCATTTTGTGCGATTTGTACCTCCCCCTTGGCCTCAAATGTCTCTCTAGTTCGTTAAAAAT CCTTGAATGGGAAAGTTGTTCTTTGCGGGAGCTACCACTTGGCTTGCCACTTGATGAACTTGTTCACTTGAAAATGCATTGCAGCAAGTTTAATCAACTG TGGAATGGAACTACACATTTTAGAAAGCTAAAATCAATTGATCTCACTGATTCTAGAGATCTGATTCGAACTCCAGATATTTCTGGGGTTCCATGTCTTG AAAGGTTAGTTTTGAAAGGTTGTAAAAACCTTGTGGAGGTTCACCAATCTGTTGCACAGCACAAGCATCTTCTTGTACTGAACTTGGAATGCTGCATCAA TCTTAAAACCCTTCCAAGAAAACTGGAGATGGATGCATTGAAGGAGCTCATTCTTTCTGGTTGCTCACGAGTTAAAAAGCTTCCCGAGTTTGAGAAGAGC ATGGCATATCTCTCTATTATTAATTTAAAAGATTGCGAAAGTCTTATTTGTCTTCCACAGAGTATCCTCAACTTGAAATCCCTTAGAGACCTCACTACCC ATGGTTGCTCAAAATTGTTTGGGCTGCCAAACAATTTAAATGAGAACAATGGTGTGGAAGAAGTTGAAGTGACTGAAGCAACAAGGAGAGAAGCATCTTC ATCTCTTAGTGATTTTAAAGCTTTGGTAACATTATTATCCAAAGGATGTGAATGGTTAATTAGCAAATCTTGGAGCATATCTCTCCCTGCTGATGAAGTA TTTGGTTGTAAGCAGTATCCAATTAGCATGGACCTGAAGTTTTCTCCTCTGTTAGGTTGCCCCATGTTGAAGAAATTAAATTTGTCATATTGTAATCTCA GTGATGGATCAATTCCTAATGATTTTGGACAATTATCTGCACTTGAAGATTTAATTCTAAATGGGAACAATTTTGTTCACCTTCCGGCATGCATTCAGAA ATTCCATCGGCTAAAACGTCTTGAATTAAGTGATTGCCCAAGGCTTCGGACGTTGCCTTTGCTTCCACCTGCTGTAACTTATTTATTTTTGGAAAATTGT ACTCAACTAGCACCAATATCATTTGACTCAGGAAGGATATGGAATATCCTTGAGGGAAGAAGACGGGAGTTGAAATATGAGTTTTGGTTCATGGTGCCAG GGAGTGAAATTCCACTATGGTTTGAGAATCAGGATTATTTTCTTCCAGACCCAAATTTACAGAGTCCTGATTATGACTATGACGAAGAGTATGGTTTTTG TGTGTCAAAGATGATAGACATCCATGACCATTATCCTTGTTGGTGGGTGGGAATTGCCGTATGCCTTTCACTACAAAACGCTGTGATCCACGAGCATGAT TGCGATGCACCAATTCATATTCAGCAGAGCCTTAAATATCCTTTGACAATTGACCCTTTAGACTTCAAGGTTGGCTATTTAACAAATTTCAAGGGCTGCC ACTTGCTTATTATAAACATAGGGAGGGGTAGTATTCCCATGCCCTATGTTTGGGGTTACAAGAAAGTGCAATTGATAATTACAGGTGAGAGTATGTGCGG GTGCGGGAAGCTGAAACTGAGGGGCTTCGGGAGCCGTGTGATATATGAGGATGATCAATGGTGGCAAAGAGATGAAGAAACAAATGAAGTTGAGGTAAAT GCATCTTCCTTTCCAGTTCAGTATGGTATTAATCTGAAGCAATCAAGAATGACTGAAATTATAGATAACTTACAATGTGATGAGCCAACAAGGAAGCATG TCAGAATCCTTTATTTCTTATTATGTTTCTTTTCTAGTTTTAACAAGCTATCCACATAACCCTTAAGCCTTAAATATTTTCAATGGCGTCCTCTTTGAAT CCCAATAGTGCGTATTCCACGTGCACTGAACTACCTGCTGGTTTTAGTCCATTATATTGTGTTTTATGTTTTGGAAGAAAAAACATACATATATCAAGTT TACAGTAATGATTCTTTTTTCTTCCGGATTTGTGTTAATTCTTGTTTGATTACACTGGAGGAAATAAGGTTTTTATGTGATTATGATAAAAAGGAACCAA ATATGGTAGATGAGATTATTTTAGATTTCTCCTTTATATTTTGTTTTTACAACAGTGAAATACACTTACTAGTTATAATAAAATGATATTGTTTTATGTC AAAA
• Tissue: pods
• Gene name: LI_gene_157150;
• Additional information: details;

Expression of Ll_transcript_423524

FPKM

• PAB: 0.7
• PNAB: 0.9
• PS1: 0.6
• PS2: 0.1
• PS3: 0.6
• PW1: 0.9
• PW2: 0.5
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_423524

• Blastp: TMV resistance protein N from Nicotiana with 34.62% of identity
• Blastx: TMV resistance protein N from Nicotiana with 35.17% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019465220.1)
• Pfam: NB-ARC domain (PF00931.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;