| Id Trinity | TRINITY_DN47978_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_423511 |
| Sequence | GTTTGAGTAAACAACAAAAAATAGAGTTATAAGTTGATCTGATAATTAGGGTAGAGGAGATTGATGATTCGAATCTCATCAACAACAAAAATACTAACAC ACTAACAATGACAAAAAAAAAGTATTCCCTAACTAACTAGTGTATTCCAAAAAATGTCATGTTGTGGTGAGAATAGCAAGTTTATTCTTTAAAGTATAGA ATAGACCTAATTGATTTGAATAATGATACCATGGCGTATGTGTAGACGTTTAACATTTTATATATTGGAATGCTTTTGTCTTTAGTAATAATTGTCTCCC CTTTAGAAAAACAATGATAACAATTTGTCTCCATTCTTAATTTTCTAAAGCTGACTGCACAATTTATGTTTAATTTTTACCGTAGACTTGGACTATTGAC TTCTTTATGCACCCAATTTAAGTGTCCTAACTATGAATTTTATGAAGGAGTTTGTAAAATGCTATTTTTTTCATGGGATTATGTCGCGTAGTTACCTAGT AGGTGGTATAGGCATGATAGCACGGATATATAATTCATCTGTTATGTGGTATGGTGAATTCGGTTTGTAATACATATGATGAATGAGAGATTCGACGTGC AATATATGAATGCCGTATGATAATTGAGTATATAGTTTGTAGAGATCTTTGCGATATTCAGATACAAAGCTTTACCTTCAATGGCTTCCAAAAGAGGTTC TTCTCATATACCAGCATGGAAGTATCATGTTTTTTTGAGTTTCAGGGGAGGAGACACTCGCAAAAGCTTTACAGATCACTTATATGCTGCTCTTAACAGA AAAGGCATTATAGTTTTCAGGGATGACGAACAACTCCTTAGAGGAGAAGTTATTTCGCAACAACTTCTTCATGCAATTCAACAATCTCTCACCTCAGTTG TTGTTATCTCCCCAGATTATGCTTCTTCTACATGGTGCTTGGAGGAACTTCACAACATCCTTGAATCCACAACAGTGTTGGGTCGCAAAGCTTTTCCAGT TTTCTATGGTGTAGATCCATCTCATGTTAGACATCAAAGTGGAAGTGTTGCAGAATCATTCAGGAAACATGAACAAAGGTTTTCTGGTGACATGGATAAG GTGCAAAGATGGAGAGATGCTTTGAGAGGAGTTGCCAATTTATCTGGAAGGGATTCCAAAGACAGGCAAGAAACAGAGCTCATTGAAGATATTGTTGAAG ACGTGTGGATAAATTTGCAACAGAAGTTGCCATCAGAGAATGATGGACTAGCTGGACATCTTTCAAGGATAAGAGAACTAGATTCACTTTTGAGTATAGA ATCATTGGATGTTCGCTTCATAGGAATATGGGGTATGGGTGGAATAGGAAAGACAACTCTTGCTAGAGTTGTTTTTGACAAAATCCGCGACAACTTTGAA ATTCCCTGCTTTCTTCATAATGTTAAAGAGGTTTCTAAAACACCAGATGGGTTGGTTTGCTTACAAAGAAAACTTCTTTCTCCCCTAAAAATAAGAAACC TTGAAATTGATGATTTGTATGATGGAAAGAAGAAAATCAGAAACCTTTTATGCAACAAAAAGGTTCTTCTAGTCCTTGACAACATTAGTTCTTTAAGCCA ACTAGAGAATTTGGCTAAAAATCAAGAGTGGTTTGGTGTAGGCAGCAGAGTAATAGTGACAACAAGGGATATGCACTTGCTGGTATCACATGGAGAATGT GAGAACTATGAGATGGAAATCTTAAAGGAAAGTGATTCTTTTCAACTCTTTAGTCAAAAAGCTTTCAAAAGTGATAAACCTCCAGAATGTTATTTAGAGC TAACTAAAAGTATTCTCCAATATGCTGGAGGTCTTCCTTTGGCACTTGAAGTATTGGGTTCTTTTCTTTGTGGGAGAAAACTCTCTGAGTGGGAGGGTGC TTTGGCAAAGATAAAACAAGTTCCGCCGGATGAGATTTGGAAGACACTAAGAGTAAGTTATGATGAACTGGAAGATGCAGAAAAGGATATGTTTCTAGAC ATTGCATTCTTCTTTGTGGGACAGTTGGAATTAGAACAAAAATTGAAAGACTGTGGTCATCGTCCAACAATAGGATTAAGTCTTCTTAGTGAGAAATCAT TGGTAACTTGCCGAAATGGAACATCGGAAATGCATGATTTGCTTCAGGAAATGGGTAAAAAGGTCGTTTTTCAAGAATCTCCCAATGATGCAAGCAGACG CAGTAGGCTGTGCTCTTTAGAAGAAGTTAATCAAGTATTGAGAAAAGCTAAGGGGACAGAATGCATTAAAGGAATAATTGTGAAGTCAAGTGACCCATGT GAAGAACATTGGGACCCTGAAGCTTTCTCAAAGATGTATAATCTTAAAGTACTGGTCATTTTGTGCGATTTGTACCTCCCCCTTGGCCTCAAATGTCTCT CTAGTTCGTTAAAAATCCTTGAATGGGAAAGTTGTTCTTTGCGGGAGCTACCACTTGGCTTGCCACTTGATGAACTTGTTCACTTGAAAATGCATTGCAG CAAACTTAAACAACTTTGGAATGGAACTCAAATTTTCAGAGAGCTAAAATCAATTGATCTCAGTGATTCCGGAGATCTAATTCAAACTCCAAATATTTCT GAGGTTCCATGTCTTGAGAGTTTAGTTTTGAAAGGTTGTAAAAATCTTGTTGAGGTTCATCAATCTGTTGCAAAGCACAAGAATGTTGCTATAATAGACC TGGAAGGTTGCATCAGTCTTAAGACCCTGCCAAGAAAATTGGAGATGAATGCTTTGGAGAAGTTCATTCTCTCTGGCTGCTCACAAATTAAAAAGCTTCC CGAATTCGGGGAGAGTATGGAATGTCTATCTATGCTTAATTTAAGAGATTGCACAAGTCTTGTTTGTCTTCCACAGAGTATTCAAAACATGAAATCCTTT AGAGATCTCAATATCCATGGTTGCTCAAAATTGTTTAAGCTGTCAAACAATTCAAATGAGAATAATGTTATGGAGGAAATTGATGAGACTGAAACAGCTA AGAGAGAAGTGCATTCATCTGCCATTGATTTAAAATCTCTGAACATGTTATTAAACAAAGGATATGTTTGGTTAATTAGCAACTCATGGAGCTTTTCTCT CCTTACTGAGAAAGTGTTTGATTTCGTAAAGTATCCAGTCAGCGTCGACTCGAAGTCGCCTTCCCTCTCAAGTTTCCCTCTGTTGAAGAAATTGGATATG GGTTGTTGTAATCTCAGTGATGGACCAATTATAGATCATATTGGACATTTAACATCACTTGAAGTATTATATTTAGCTGGGAACAACTTTGTTGACCTTA CAGCAAGCATTGGTAATCTTTCTCGGCTACAACGCCTTGGTTTATATAAATGCCGAAGACTTAGGACACTTCCTGAGCTTCCAGCCAGTGTATGCCAGCT ACTTATGAACGACTGCACTCAACTGGAACCTATGTTATTCGACACACACAGAATACGGAAAATATTTGAGGCAAATAGATGGAGCCTGACACGTGAATTG TGGTTCCTGATTCCAGGGAGCGAAATCCCGCCATGGTTTGAGCATCAAGATTATTTTACCCTGAAACCAAGTTTAGCGCCTTTCGATTATCATGAGGAGT ATGCTTTTATTGTTTCTACAATAGTAAACATCCCTGACTATTGCCTTTCAAGTGACTGGATAGGAATTTTTGTATGCTTTTTACTGGAAAGTGGTTTAAA GGCAGACCCACACAGACATATCCATCGAAGTCCGGTCACGATCGGATGGTCTTTTAAAGATCCCGATACAGAAATGGTTTACCCCTTACGCTTCACTAAA CGCCGTTGGACACATTTCAAAGGCAAACACCTGTTTGTTACTACTTTTGGAAGTGATCATAGAATATACAAGCACTACTTAACTTGTGGCAAAAGCAAAG TGCAGTTGATATTTTGTGGTGAGAATATTTGCAAGTGTGGGAAGCTAAAACTGGAAAACTGTGGGATTCGTGTGATTTGTAAGGAAGATGGTGTGTCCCG TAGAGGCGAGGAAACAAGTGAATTTGAGGTGCCTTCTACTTCAGTTGAATCTGGTGTTCACAAGCAATCAAGAATAACCGAAATTACAGATGAATACGAA GGAGATACGAACCAATCACATATTACCTCATGAATAACACAATATTTTTAAAAATAACATTCTGATTGGTTCAGACAAATAATGAGATACCTTTCGGGAC TCTCTGTCCTTAATTCATAGCGTATAATATATGTGAGCATCTACATCTTCTTTTGTTTTGTTGTCATGATTATTAGTTCATGTGAGTTACAGTTGGTGCA GACATTAATTTGGTATGTACCAATAGATTGACTCTTCAAAGTAAAAAGGTATAATGCATATTATTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_157150; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_423511
| Blastp | TMV resistance protein N from Nicotiana with 36.94% of identity |
|---|---|
| Blastx | TMV resistance protein N from Nicotiana with 36.73% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459892.1) |
| Pfam | TIR domain (PF01582.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |