| Id Trinity | TRINITY_DN47980_c4_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_423308 |
| Sequence | TTATTATTCTCTTTCTTTCTTCATGGCCACAACATCAATCATTATTTCTGCTACTTCTAGTTCCAATTCTGCTCAAGGTAAAAAATGCAAGTATGTTGGT CAATCAGTGAGAGCAGTTCCGTTACGTATTGTATCGGTAGGGAAGAAGCGATCAAAAGGATTGCAACTCATTGTTGATGACTATGTTGAAAAGCTCAAGT ATTATTGTGCCGTTGAGGATGTTCAAATTCGGTCCAACCCTAGAAATGCACGGTGAATTCACTATGTTCTTTTAGAATTTCACTGGAAATTGTCAATTGT TATCTTACCAATGTCACACAAAAAAGGGTGGCCCACTGCACGAGGCTCCCACCGAATGAGGTATGGGGAGGGTAGATCTATGCAGCCTTACCATCGCAAG TAAAGAGGGTGTTTAAGGATTTGAACTCCATGACCTCCAAGTCACAAGGCGTGCAACTTTACCGTTGCGCCGAGGCTCACCCTCTGCACACCTGTACACG AGAACTGACATTTTTTCATTGTTTAATAGAAGTGGTTGATCATTTGTTTGCAATGTAGTGACCAAAGGGCTCAGGTTGATGACGAAGACAGTGCTGTGAT GAACCTTATCAGGTCTGATGATTGGGTAATAACAAATAATTTTATTGTCCTTGTTAGAATAAAAGAATTGCTTTCACTGTTCATACTACTTGTTTACGGT GCTCCAATTTGTCATGCACATTCTTTCTAGGAACATCATAACTCTTACAGATTAGACACTTATAATTCAACACCCAACACACTCATTCTATTAGTCTATT TAAACATGAAGATCTTGTTGCATTTGCATGTTATATCTTTTAATTACTTCGGTTATCATCATTTCAAATTTGGCACACATTGTAATACCTTTCCTTTTCC GGCATCCACTTTAAGTCCTTGCATAGATGCAGTAACTGCTTCCAACTCATATTTTTCAAGATATAATGTGATAGTTGCAGATTTATAGATTTCTGTTTTA TCTGCAAGATTTGGCCTTTCTTTTTCTATCCCGCCTAATTAAGTGTTTCACATAGTACTTGAACTTATAGGTTGTGATGTTGGATGAACATGGACAAGAC ATAGGATCTGAGCAAATGGCAGAGTTGGTGGGTGATGCTGGAAATACTGGTGCTTCAAGATTATCATTCTGTATTGGTGGACCCTATGGTCATGGAAGAA AGTTGCGGGAACGTGCTAACGTATCAATCAAGTTATCTTCACTCGTCTTAAATCATCAAATAGCATTACTTGTGCTCATGGAACAGCTTTATAGGTCATG GACAATTTTAAGGGGACAAAAGTACCATCACTAAATATCCTATCTCATTTTGTTTCTTTTTCATTATGTATTTTGTGATCTATCCAATTTTCCTTTTGAC CCTTGCTTCTTTTGAATTTTTGTTGTAAATGACTTGCAACAATTAATTATGGCACCAAATGTTTATAACTACCCGAGTCACGACCATGTCATTCTCTTTC AGACGTTTCATGACACTAACAAAAAATGTACAAATAGACTATCAACACAATATAGTTGCCCATGCCAAATTTCCACCCTCCTATGTGGGACTTTGGGGTT TTATCTCAACTAGATTAATTCATTGTACATATGAAGTAACATTTGTTTAGTGTCAGATAACAATATTATCTATGTACTTTGTATTTTTTAGTATTAAATT TGAAACTTCTGGAACCATTTGTCTCATTGGAAGAATAGGATTGTGCTTATGACTTGTATGTAGAAACATTCATCAACTAATTTTCCATTGAGTCCTAAAT GGTTTCAATCAGACTAACATGTTATGTTGAATGTTCTTAGTCTCCATGATATAGTGGTACTAAGGTTTGGTTGTTGTTCTTGTATGGAAGATGAGTCCTT GATGTGCCTAGTTCACTCATAATATTTGCTTGGATAACAATGCCATTAACTATGGTTAGACTTCAGTCCCCAGAGCAAGGTTTTCTTGTAAAGGACTGCC TTTGTTTTGTAAGGGTTTTCTATTTGAAAATTAATGCTTATCATAGTTGGCTTGTTCTCCTAAGACTTCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_157179; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_423308
| Blastp | - |
|---|---|
| Blastx | Putative RNA methyltransferase At5g10620 from Arabidopsis with 79.31% of identity |
| Eggnog | rRNA processing(COG1576) |
| Kegg | Link to kegg annotations (AT5G10620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447505.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |