Ll_transcript_424511

• Id Trinity: TRINITY_DN47981_c6_g5_i1
• Name Transcript: Ll_transcript_424511
• Sequence: CGAGATTAATTTATAAATATCCGAAGTAGTAGGAATTGGAGAGGGAGACAAATCAATCAATTTTAGCAAGTGAGAGAACCGATCAAGAAATGAAGTTATG GATTCTTCTTCTTCTCATACTCTCTTTTATCCTTCACCCATTACCATCATCATCTTCATCTTCATTATTCAAGCATAGATTATTGAGAGCAAAAGCTTCT TCAATAAAACAAACAGAACCACAAATATCATACCAAACCCGATTCTTCCAACAAAATCTAGACCACTTCACCTTCAACAACAATCCTCTCACTTTCCCTC AACGTTACCTCATCAACACTGATCACTGGAACCCTTCTTCAGTGGGTCCCATCTTCTTCTACTGTGGCAATGAAGGGGACATTGTATGGTTCGCACAAAA CTCTGGTTTTCTTTGGGAAATAGCACCTTTGTTCAAAGCTATGCTTGTTTTTCCTGAGCATCGTTATTATGGTGAATCTGTTCCATTTGGAAGTAAATAT GTGGCGTATAACAATGCTTCTACTTTATCTTATCTTACTTCTGAACAAGCACTTGCTGATTTCGCTGTTCTTATTACTCATCTCAAGCGTAATTATTCTG CACTACTTTCCCCTGTTGTCTTGTTTGGAGGATCATATGGTGGAATGTTAGCTGCATGGATGAGACTCAAATATCCTCATATTGCTGTTGGTGCACTTGC TTCTTCAGCTCCAATTCTTCAATTTGAAGACATTATTCCACCACAAACTTTCTATGACATTGTTTCCAATGATTTCAGGCGTGAAAGTCTCACTTGCTTT AATTATATAAAACAATCATGGGATGAAATAGCATCTCGGGGTCAAACAAATGATGGCCTTGCACAACTGACCAGAACTTTCAACTTTTGTCAGCAATTGG AAAGTGCCGAAGATCTAAGCGGCTGGTTGTCGTCTGCATATAGTTATTTAGCAATGGTGAACTACCCATATCCTGCTGATTTTATGATGCCTTTGCCTGG ACACCCAATCAAGGAGGTTTGCAGAAGGATTGATGGGGGTCGACCTGGGACTAGTATTCCGGAGCGCATATATGAAGGAGTGAATGTCTATTACAATTAT ACCGGAGAAGCTAAATGTTTTGAACTGGATGATGATCCTCACGGCTTGAGTGGCTGGGACTGGCAGGCTTGCACTGAAATGGTTATGCCGATGTCTAGCA GTCCAGATTCCAGCATGTTTCCACCATATGAGTATAATTACTCTTCTTTTGAAGAGGATTGCTTAAAGGAGTTTGGAGTGAAGCCAAGGCCAAAATGGAT TACTACAGAATTCGGTGGTCATAATATTCATGCCACATTGAAGAATTTTGGAAGCAATATCATTTTTTCAAATGGCCTATTGGACCCATGGAGTGGTGGC AGTGTGTTGCAGAATATCTCTGAAAGTGTTGTTGCTCTAGTCACTGAAGAAGGTGCACACCACATAGATTTGCGCGCTTCAACAGAAAACGATCCAAATT GGTTGATAGAGCAGAGGGCCACTGAAATTAAGCTAATACAAGGTTGGATTAGCGATCATTACCAGAAAAACAAAGTCATATTTGACATGTAATATATGGA ACTTCTTTTAGCCCACTATTCTCATAAATTGCTTCACAATATTCCGTGCATCGTTCCCAAATAAGTATTACGGGTGTTTGGTTCATCACTTTTATTTCAT CCCTTTTATGTGATTTATTTTAAGATAAAAGTTTAGTAATTTAAATTGTGAACCACTTTATATGATACAGCTGCAATATTTTAGTTGTGGTGATCAAAGT AACCACATCATACCACAATTATGGTATGACTCTGAATTGCAATGATTCTGCTGTAATGCAACCGCATCAACAGTGAAGGTGAGCTTCTTTTAATCCTTTT TTTTTCTTCTGCTTTCTCTTTTTAAAAACTACACATTCTTCTCTCATCCG
• Tissue: pods
• Gene name: LI_gene_157196;
• Additional information: details;

Expression of Ll_transcript_424511

FPKM

• PAB: 7
• PNAB: 11.8
• PS1: 10.6
• PS2: 9.2
• PS3: 14.4
• PW1: 10.1
• PW2: 14.2
• PW3: 11.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_424511

• Blastp: Lysosomal Pro-X carboxypeptidase from Bos with 47.08% of identity
• Blastx: Lysosomal Pro-X carboxypeptidase from Pongo with 47.35% of identity
• Eggnog: Lysosomal Pro-X(ENOG410Y38A)
• Kegg: Link to kegg annotations (534927)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422329.1)
• Pfam: Serine carboxypeptidase S28 (PF05577.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;