| Id Trinity | TRINITY_DN47982_c4_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_424317 |
| Sequence | CCTGATCTCATACATACCTCTCCTTCCTCCACAATCCTAAAAAGCAGGAAGTGCCATTTGCTTTTAAAATTTCATGTTGCACAAAAGTGCTTCCACAATG TCGAACAGGAAGCTCTGCATGACCCTCTCCAATTTTCTCAGGCGCACAACTTTATTTCCCCAAAATTCTACCTTAAACCTTTCTTCTCCTCAGATTAAAC TTTCATCATCACCCTTCGAAATCCAAATTCCCAATTTTCATAAACCCACGTTCTATGATAATTCTCTTGAGTTTCTCAGATTTTCCGGGGAAAGAAGCTG GTGCTCAAAATCTGCAGAGAAACTGCAAAGTAGTGGTAGTAGGTGTTGGAATTGTGATGCTGTTCCTACTGCATCTGAATCGGCAGCACCATTCCTGTTC TGTGAGTCATGCCAATGTATTCAACCCGTGGATTATTCTATTGACTATTTCCAGATATTTGGCTTGTAAGTTTTTTGGGATTTTAATTTCATTGTTTTGG TTTTCGAACTCTGAAACTTCTGACCTTTATAACAATCCATGTTTTTTCACCTTGACTTGTTATTGGTTAATGATATAGCTGATAGAAATGTTAAGTTTGT AATTTACAAGGTTATTGTCGATTCTGTCTGTTTTAAGGCACATAGAGATTTTAGTAGTAATTGAAGCTTGATAATTAATAAGTATTACAACAATAACCAT AGTCCTCCTGGTGGAGTCGGATACATGAGTCGAGCCAGATCATAATGCCATAATGTAAATCATGCCCATTGACATAAGCATATTATGATACCTACTTATT TCCTAATCATTTCCCCATGGTTTTACTTGGTTTCTCATTGCCTCTACAAATTGGATTAAACTCGAGTTGATCTACTCTCCATACTTGAGCTTTTGATGGT CTCGTTCACATGTGCCCAAGAGGCGTGATCCTAACATCTTTTCAATAATTAATAAGTATTAGCATATTGGTTTTCTCCCTTGCTTCAGTTTCAAACAAAG ATAAAGATTATATGCTTTTATGCTTATGTCTACCCTTCCCACTTCCCACTAAGTGAGATCCTCCTACATTGAGGTGTCCTTTTATGTGTCCATAACTCAT AATTGTGTCCTCTATATATATTCAGAGTATTTCTGGTGCTGTTAGTTATTAGTTTTCTGTTCTTTTTGTTTTTTTATAAGAAGAAAATAGAAGTCTATTG ATTTTTTTGTCTCATAGGTTTGATATCTAAGTTGAGATATAAAACAGGGAGAAGAAGTATGATATAGAAGATAATAATTTGGAGGGTAAGTATAAAGATT GGCAAAAGAAACTGCATCCTGATTTAGTACATTCAAAATCTCAGAAAGAAAGAGATTTTGCTGCTGAACAATCTGCAAGGGTGATCGATGCATACCGTAC ACTTAGAACGCCTCTGTCAAGAGGGATTTATATGCTGAAACTTGATGGAGTAGAAGTTGATGAGGAACAGACCATTTCGGATCCAGAATTACTAGCTGAG ATTATGGATATCAGGGAAGAAGTTGAAGAAGCAACTAACTCTGAGACTTTGAATCACATCCTCTCTCAGATGCAGGAGAAAATGCAAACTTGGTCTACTG CCTTTGCTGATGCTTTTCAAAGTCAGAAATTTGAAGAAGCAAAAACTTCAATTCAGAGAATGACTTACTATAGTCGTGCTACTCCTGCTAGAGATGAAAG TATGAAACCTGAAAAAGAACGATTGAAGCCAGGGTGAAGACGGACTTGTACATCTCCAAAGATATCATTTCTGTAGTACTCCTGCCAGCTGAGCTGCAAT GCTTTCTCAATAAAATGTATCTCTCTGTCAACTACTGATGATTCATGGTTTTAAGTTGTGGTTATGGCTTTAGCCGCATTGCATTTATTGCAATTTCGAT AAATTGTTGAAAAATGCAACTAACTACGATTGCGATGCAGTTGTGGAGGCTCCAAAACCATAATATTGGACCGCAAATGCCGTTGATATATTCTTTCCAT AGTTTACTTACCTCGTAAATGGGATAAGATAGTCCATTTTACTAACCAAAAATATCTTTAGCCCCTACTTGTAGGGTTGCCTCTAATTCCTTTATTTCAT ATTATTATTGATTTTATTACTGTAGGCTTTCAAATATGGGTCTATTCCCTTTTGGAGCAAATAATAGATCAGTATGAAACATTTGAACGAGACACTTCTC CCATTGAAGTAGCCTATCAATTGTCAATGGAATCAATGCTCCTTTATGAACATGGGTATACATTTTGTCATGACATCATAAGCACGATCACCCTTCAGAT CGTCTACATGAAACTAAGAACACTGTTTTATTCCTGGAAATAGTTATTGTGTAGTGTTTTTCTCAACCAAGAGTTGAAGGCTATGGGAAATTTGCTACAC TTGTTTTGAATTTTAATAAAGGTGTTTGTTTTGGTAAAGGTGTTTGTGGAACTAAATACTTGATCAAGCTAGTCTATTTTAAACATACAAGCTTACACTC GAAGTTGAACTCGACTTGTTTAAATGAGCTTAGCTCCGGCACTATAAACTCAACATTAAAAACGCTCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_157209; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_424317
| Blastp | Iron-sulfur cluster co-chaperone protein HscB, mitochondrial from Homo with 34.15% of identity |
|---|---|
| Blastx | Iron-sulfur cluster co-chaperone protein HscB, mitochondrial from Homo with 36.62% of identity |
| Eggnog | protein oligomerization(COG1076) |
| Kegg | Link to kegg annotations (150274) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443103.1) |
| Pfam | HSCB C-terminal oligomerisation domain (PF07743.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |