| Id Trinity | TRINITY_DN47985_c2_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_422609 |
| Sequence | TTGAAACAAACCTTTAAATGGAGACAAATCATTTAATCGAACCAAACCAGAAACGAGTTGTTAAAGATTAACATTAACAAGACTTGGATGTTTGTGAGTT TTTTATGTTGTTTCTTTAAGAATCTGAAACAAGGTTAAGGTTGAAAAATCCCAAGGGCTTTTTTCCCCTAAGCTGCTTCTGCAGCTATTCTCTTCTTCAT CTCCATTTCCACCATTCAAATCTAAGCTTCACTTTATGTCACTTTTCATCTGATCAATGCTCAATTTTCTCAGGTTCTCTCTTCGATCTTCGTTCCTCTC TCTTTTCTTCACATTCATTGTAGTTCTGTGATGGTTCAGTACTGAACTATGTGATTTGATCATGAGGTAAATCTTACAACAAAACCGTAAAAAAATCACA CCCCTTAATACCCTTTTGCCAAATTTGTTGACCCAAATAACTGTATCATTAGTTTGTTGTATATTTGTTGATTCTGTTTTGTACCATTAACATTTGGAAA ATGAAAAGTTAGGTTTTTTTTTCATTGATTTTTCACCCAAGTATTAATCACTGAAGAAGGTTATTGAAGTTAATTGGAGGATGATCTCAAATAGTTCATC CTTTGATTGCCTTGGACTTGAAGTTGTTGGTAAAAACAATGATAATCTTGTAAAAGATCGTGTTGGTAATGCTGACAGTGACAATGTGAGACAAAGGAAC TTGTTTTGTCAGCTGTTAAAGGTTTACCGAGAGGTGAATTCCTCCGGCGGAATTGTTCGGCCTGTGTCGGTTTTGCTCGGGGATGGTCAAGTGCTGGATT TGTACAAACTGTTTTCCCTTGTGAAGGAAAGAGGTGGGTATGCTGCGGTGTCGAGAAAAGGGTCGTGGGGCTTTGTGACGAAGGGATTAGGTTTGGACCT TGAAGTTTTGGCTTCAGTGAAACTTGCTTATGATAAGTATTTGAACGATTTTGAAGCATGGCTCAAGAAGACTTTTGAAGAGAAAATTATCAGAAATAGG AATCATGGATATGGTTGGAGTTTTAAGCCGTTTCCATTGGAGATGGAGAAGGAGTTGAGTGTCCTATTGTGTCTTGATCTAAAGGAGAAAGACGATGAAC TTGATATAAAGGAGAAAGATGATGAACTCGATATAAAGGAGGACAACACTAAACTTGAGTTAAAATCAAAGAAAATTAGAAGGTTCATTGATTTGCTGGT TAACCACAAGAATGAGACAAAATTGTTGGACACCAATAATCAAAATAACATATGTGAGGATGTTCAAAATGTCCATGTTGATGGAGACGAAAAATTATGC AGCGGTGATAAGTATGATCTTGCTATCTTGGATAAGGAAGATGTTGAGAAGGAATATAATAATCGCAAGCGCAAGCGGGAATCGTTGACTGGAATGCTAA ACTGGATGAAGCATATTGCAAAGCATCCTCTGGTTCCTGTAACTCCACCTTTACCAAAACCATCGAAGTGGAAGGAATATAAAGGCGAAGACTTTTTTTC CCTGTTACTAAGGGCAAGAAAGGTTCTATTGTTGAAACATTGTGTAGAACCAAATGGTGGACCCGCTTCCTTGCAGAATCAGAAGATGCATCCTTCCATG TATGAGGATGAAGTTGCTTGTGATCGCCATTCTACAGCGAGGTTGAAATGTAGTGGAAGGCATGCTACCTCTGTTAAGTCTCGTTTGTGCTCTTGTTGCA AGTCGCGTTCTGCCGATGAAAATAGATTGACTAGTTCTGTCAACAAGGAGGCAGAAAAATGTCCCCCAAAGGAAACTGCAAAAGTAGATTTGTTGACTGC AAAGATAATGGCTAAAAAGGCTGGTAAGGTTTGCGAAAAAGGGAATGTTTCTATCGGTCCTCGTTACCAAGCAGAAGTCCCGGAATGGACTGGTGTAGTT TCTGAGAGCGACTCTAAATGGCCAGGCACACAAATATGGCCTCCGCCGGAACAGGACTCAAAACCTGCTACTGAAACAGACCTTATTGGGAGAGAAAGAG AAGATAAGTGTAGCTGCGAAGTTATAGGTTCTGTTCAGTGTCATAGATTTCATATCGCTGAAAATCGGCTGAAAATGAAGCTTGAATTGGGACCTTTATT TTACCATTGGGGATTTGATCGTATGGGCGAGGAAGTTTCACTTCAATGGACAACCCTAGAAGAAAAGAAATTTAAGGATTTGTTGAGATCACATGCTCCA ATTTGGAACAACACATCCATATACTTTCGGAAGAAGAAAAGAAGAAACTTGGTGAACTATTACTTCAATGAATTTGTTATCCAACTAAGAAGCTATCAGA ATCGCGTGACTCCGAATAACATCGACAGTGATGATGATGAAGCGGAATTTGGATCTTTCGGTCATGGTTTTGGGATGGAAGCTCTCATGGTAGATGACGT TTTGCCGGAGTGTTCAGTGAATAAGCAGTGCACTGATTTCGAGTACTAGATAAAATCGGAGTAAAATTTTGATACTCTAATCTCTCTTCCTCTATGATCA TTAGTGAATGCATTCTCTACACTATGAAATTTTGGTATAGCATAAAGGAAAAGAGAGAAAAGAACCCAGGTTTGAAGCAATTATGCATGTTATGTAGCAG TTTTAGTCCAATGTTTCATGGAGGCTGCACTTTAGTGCTCTAAAACTAGTTGTTTAGTTTGAGAATTGCATGAACCTTCAAATTAATGTTTTTACTTAGT TTTTTGTACATTACATTTACAAATTTTATTTGTGCCATGTCCTGACTTTAGAATATTTTAATCATGGGATAGGATAGCTTTTACTCTCCTTAATGTTTTT CTTAAAGAAACTTACCAACTTTAGTACATTAGAGAATTTTATTATTGGTAGAAATGTTTGAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_157239; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_422609
| Blastp | AT-rich interactive domain-containing protein 2 from Arabidopsis with 41.11% of identity |
|---|---|
| Blastx | AT-rich interactive domain-containing protein 2 from Arabidopsis with 41.03% of identity |
| Eggnog | NA(ENOG410YHCT) |
| Kegg | Link to kegg annotations (AT4G11400) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424146.1) |
| Pfam | ARID/BRIGHT DNA binding domain (PF01388.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |