Ll_transcript_422613

• Id Trinity: TRINITY_DN47985_c2_g2_i4
• Name Transcript: Ll_transcript_422613
• Sequence: AAAGAAGTTGATGGGAAAAAAGAACCAACGAGTTAGAGAAACCTTTGTTCTCATCATTTCTAAGCCTTAACTCTATCTCCATTTGCAGCATTCACTTCTA AGCTCTACCTCGTGTCACCTCATCTCATCAATGCTCAATTTTCTCAGGTTCTATCTTCGATCTTGGCCCCTCTCTCTTCTCTTCACCACCATTATAGTTC TGTGATGGCTCAGTACTGAGCTAGATGAGTTGATCATGAGGTAAATATAACAGAACTAGTAAAAATATCACATATTTTAATACCCTTTTAAACCCTTTCG CCAATTCTGTTTGCCCAGATCACTGTATCATTAGATTTTTGTATATTTGTTGATACTGTTTTGTACTATTAACATTTAGAAAATAAAAAGTTAGGTTTTT TATCCTTAATTTCATTGATTTGTTTACCAAAACACCAATCACTGAAGAAGGTATTTGAAGTTAATTGGAGGATGGTCTTAAATAAGTTATTATTAGATTG CCTTGGACTTGAAGCTGTTGGTGGAGACAATGATAACATTGTAAAAGACCGTATTGATAATGCTGATAGTGACAATGTTAAACAAAAAAACTTGTTTTAT CACCTTTTAAAGGTGTATCGAGAGCTGAATCGAGACATTGTTTGGCCTGTGTTGCCTTCGCTCGGGGATGGTCGAAAGCTGGATTTGTACAGACTGTTCT CCCTTGTAAAGGGAAGAGGAGGTTATGCCGCTGTGTCGAGGAAAGGATCATGGGGTTTTGTGACGAGGGAATTAGGTTTTCACCTTCGAGCTTTGGCTTC GGTGAAACTAGCTTATGGCAAGTATCTGAATGATTTTGAAGCATGGCTCAAGACGACTTTTGAAGATAATTCTTTTAGAAATTGGAATCATGGATACAGT TGGGGTTTTAAGCCGTTGCCGTTGGAGATAGAGAAGGAGTTGAGAGGCCTATTGTGTACTGATCTCAAGGAGAAAGACGATGAACATGATATAGAGGAGA AAGACGATGAGCTCGATCTAGAGGAAAAAGACGATGAACTTGATCTTGAGGAGAAAGACAATGAACTTGATCCAAAGGAGAAAGACGATGAACTTGATCC AAAGGAGAAAGACGATGAACTTGATCTAAAGGAGAAAGACGATGAACTTGATCTAAAGGAGAAAGACGGTGAAGTTGATCTAAAGGAGAAAGGCGGTGAA GTTGAAATAAAGGAGGAAGAAGATAAGCTTGTTGAGTTAAATTTAAAGAAAATTAGAAAGTGCATCGATTCCGTTAACCACAAGAATGAGACAAATGTAT TGGACACCAAAAATCAAGATAACATATGTGAGGATGTCCAAAATGTACATGCTGACGATGAAGTAAAATTATGCATGGGTGATAAGGATAATCAGGCTAC CTTGGATAAGGAAGATGTTGAGAAGGAATTTAACAATCGCAAGCGCAAGCGGGAAGCGTTATCTGGAATTCTAAACTGGATGAAACATATCGCAAAGTGT CCTCTGGTTCCTGTAACTCCACCTATACCAAAACCATTAAAGTGGAAGGAATATAAAGGCGAAGACTGTTTTTTCCAGTTACTGAGGGCAAGAGAGGTTC TACTGTTGAAACAGTGTGTAGAACCAAACAGTGGACCCAATTCTTCCCAGAATCAGAAGATGCATCCTTCCATGTACGAGGATGAAGTTGCTCGTGGTCA CCATTCTACTGCGAGATTGAGATGTAGTGGAAGGCAGCCTACTTCTTTTAAGTCTCGCTTGTGCTCTTGTTGCAATTCACGTTCTGCTGATGGAAATAGG TTGAAAAATTCTGTCAATACAGAGGCAAAAAAATGTCCACTGAAGAAAACTTCAAAAGTAGATTCGTTGACTGCAAAGGTAATGGCGAAGAAATCCGGTG ATAAGGTTTGCATAAAAGAGAAAGTTTATATTGGTCCTCGTCACCAAGCAGAAGTCCCAGAATGGACTGGTGTTATTTCAGAGAGTGACTCTAAATGGTC AGGCACGCTAGTATGGCCTCTGCCAGAACACGACTCAAAACCAGCTACTGAAACAGACCTTAGCCGTAGAGAAAGAAAAGATAAGTGTAGCTGTAAAATT CCGGGTTCTGTTCAGTGTCATAGATTTCATATTGCTGAAAATAGGCTGAAATTGAGGCTTGAATTGGGTCCTCTATTTTATCATTGGGGATTTGATCATA TGGGCGAGGAAGTTTCACTTCGATGGACAACTGTAGAAGAAAGGAGATTTAAGTATTTGTTGAGATCACATGCTCCGATTTGGAACAGCACATCCATATA CTTTCCAAGGAAGAGGAGAAAAGACTTGGTGAGCTATTACTTCAATGAATTTGTTATCCAACTAAGAACTTATCAAAACCGTGTGACTCCGAATAGCGTT GGTAGTGATAACGATGAAGCAGAATTTGGATCCTTTGGTCATGGTTTCAGGATGGAAACTCTCGGGGCACGTGAAGTTTTGCCAGAGTGTTCAGAGAACA AACAGTGCACTGATTTTGAGTATTAGACAAAATTGGAGTCAAAATTTGATAATTTAAACTCTTCCTCTATTATCAGTAGTAAATGCATTCCCTACACTAG GAAATTTTGGTATAGCATGAGGGAGAGAGGAAAGAATCAAGGTTGGAAGCAACTATGCATGTCTTCTCAAGTTTTGACTACCTTCAATGCTGAGATTGCA AAGTTGCTATTAACTTTGTTGGAGATGGTTATGCTTGTTGAAGGGTGCACTTTAGTGCTCTAGAACTAGTAGAGTTTAGTCTGATAATTGCATGAACCTT TCAACTTATGTTTTTGGTTAGCTTTTTGTACATCACATTTAGTTTTTTTTTACATTATTATAATCCTGACATTAGAATATTTAGAATATTATGTGGCCCT TTTTTAGTTGTTCTTTAGCATGTATGAATGAAGTGGCAACATTTGAGAAGTGGTTTTGGGATTAAACCGGAC
• Tissue: pods
• Gene name: LI_gene_157239;
• Additional information: details;

Expression of Ll_transcript_422613

FPKM

• PAB: 0.3
• PNAB: 2.1
• PS1: 2.5
• PS2: 3.6
• PS3: 4.8
• PW1: 1.7
• PW2: 1.3
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_422613

• Blastp: AT-rich interactive domain-containing protein 2 from Arabidopsis with 40.16% of identity
• Blastx: AT-rich interactive domain-containing protein 2 from Arabidopsis with 40.16% of identity
• Eggnog: NA(ENOG410YHCT)
• Kegg: Link to kegg annotations (AT4G11400)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429881.1)
• Pfam: ARID/BRIGHT DNA binding domain (PF01388.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;