Ll_transcript_422239

• Id Trinity: TRINITY_DN47993_c3_g1_i12
• Name Transcript: Ll_transcript_422239
• Sequence: AAAATAACTTTGCAGAGTTGGGTGGAGATTAGAACAGAGGAGAGGGTTCTGATTACAATACAAGTTCATCATCATCATCATGTCGGGTATGGGAGACGGG TACGTCGGCACCTCCCAAGACGCGGTGAGGATACGGCGGTTGGAGAAGCAGAGAGAAGCTGAACGCCGCAAAATCCAAGAACTCAAAACCAAGTCTGTCT CCGAAAAGGGCCAGCCTGGCCTCCTCCAATTCGGTTCCAGCACTTCTGAGATTCTAGAGACTGCGTTCAAGAAGGAAACTGTTGGTCTCGTAACCAGAGA GGAGTATGTAGAGAAGAGGGTTAATATTAAGACCAAAATTGAAGAGGAAGAGAAGGAGAAGCTTCAGAAGCAACAGCAAGAGGAGGAGGAGTTTCAATTG CAAAAGCGTAAGAAGAGGAAGATAAAGGGGAACTCTCGATTGTCATTTGCTGAGGATATTGAGAATGATGGTGAAGAGGAGGAAGGACAAGATACAGAAA ATCTGGAAACAAATAGACTAAGGCATGGTAAACTTGGTAAAGACCCTACAGTTGAAACTAGCTTTCTACCTGACAGTGAGCGAGAGGCTGAGGAGGAAGC TGAGCGTGAAAGACTGCGGAAACAATGGCTTCGTGAACAGGAGCAAATTCGAAATGAGCCTCTTCAAATCACATACAGCTACTGGGATGGAACTGGCCAC AGGCGTGTGATCCAGGTACGCAAGGGTGACAGTATAGGAGAGTTTCTCAGAGCAGTCCAGCAGCAACTGGCTCCTGAGTTCCGAGAGATTCGAACTACAT CAGTTGAAAATATGCTATATGTGAAAGAAGATCTTATCATTCCTCACCAACACAGTTTCTATGAGCTAATTGTGAATAAAGCTAGAGGCAAGAGTGGACC GCTTTTTCATTTTGATGTTCATGAGGATGTCCGAACAACTGCTGATGCCACTATTGAGAAGGATGAGTCTCATGCGGGGAAGGTTGTAGAAAGGCACTGG TACGAAAAGAACAAGCATATATTTCCAGCTTCAAGATGGGAGATATATGATCCAACAAGGAAATGGGAACGTTATACCATCCATGGAGATTGATTTGTGA CTGCCATAAAACTTTCCTTTGCATTTGTTGTCTTATGATATTATTAATATATTAATGGACGAGAAAATTGCAAATTCTGTTTGATTTATTGTTGAAATGA CACTACATAATTTTGAAGAGTTAAAACTTGATGCGTATTTCACATTGTTAACAATTATGTGGTGCTATAATATTTTTGCTGCACAATGATGGTATCATTG TTGCTTATTGACTAAAAGTTTATATATTTAAATCTTAGAAATAGTTTTCCTGTTTACAATTACAAGTTAAAGCTGTGTATATTTACTTTTCTTAGACCTA TTATAGGTGTGAGCCTCGTACACTTAAGCGTGTTTCTTATAGTATTGGAGTATGGTGACACCATGGCAGCAACATAGGCCACCTGGCAGCATCAAATTAG GTAACTCACCCTCGCGGGATCGCGATCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAAGGCATAAGGGGCATGATGACTTGACGTCATCCTCACC TTCCTCCGGCTTATCACCAGCAGTCTGCTCAGGATTCCAAACTCAACGTTGG
• Tissue: pods
• Gene name: LI_gene_157312;
• Additional information: details;

Expression of Ll_transcript_422239

FPKM

• PAB: 7.3
• PNAB: 10.3
• PS1: 10.4
• PS2: 7
• PS3: 10.8
• PW1: 11.1
• PW2: 12.2
• PW3: 11.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_422239

• Blastp: Protein XAP5 CIRCADIAN TIMEKEEPER from Arabidopsis with 84.62% of identity
• Blastx: Protein XAP5 CIRCADIAN TIMEKEEPER from Arabidopsis with 81.07% of identity
• Eggnog: Family with sequence similarity 50, member(ENOG410XNXM)
• Kegg: Link to kegg annotations (AT2G21150)
• CantataDB: Link to cantataDB annotations (CNT0001676)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414267.1)
• Pfam: XAP5, circadian clock regulator (PF04921.13)
• Rfam: SSU_rRNA_archaea (RF01959)
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;