Ll_transcript_422228

• Id Trinity: TRINITY_DN47993_c3_g1_i2
• Name Transcript: Ll_transcript_422228
• Sequence: AAAATAACTTTGCAGAGTTGGGTGGAGATTAGAACAGAGGAGAGGGTTCTGATTACAATACAAGTTCATCATCATCATCATGTCGGGTATGGGAGACGGG TACGTCGGCACCTCCCAAGACGCGGTGAGGATACGGCGGTTGGAGAAGCAGAGAGAAGCTGAACGCCGCAAAATCCAAGAACTCAAAACCAAGTCTGTCT CCGAAAAGGGCCAGCCTGGCCTCCTCCAATTCGGTTCCAGCACTTCTGAGATTCTAGAGACTGCGTTCAAGAAGGAAACTGTTGGTCTCGTAACCAGAGA GGAGTATGTAGAGAAGAGGGTTAATATTAAGACCAAAATTGAAGAGGAAGAGAAGGAGAAGCTTCAGAAGCAACAGCAAGAGGAGGAGGAGTTTCAATTG CAAAAGCGTAAGAAGAGGAAGATAAAGGGGAACTCTCGATTGTCATTTGCTGAGGATATTGAGAATGATGGTGAAGAGGAGGAAGGACAAGATACAGAAA ATCTGGAAACAAATAGACTAAGGCATGGTAAACTTGGTAAAGACCCTACAGTTGAAACTAGCTTTCTACCTGACAGGTATGGAATATCTCCTTTTTCTTT CTCTCTCTTACCCCTTCCCCCAATACCCCTCTCCTTTCTTTATTATTTGCTTCCCTAACGTTCGGGCATAGGAGTGCCGAGGATTCTGTAGTGAGCGAGA GGCTGAGGAGGAAGCTGAGCGTGAAAGACTGCGGAAACAATGGCTTCGTGAACAGGAGCAAATTCGAAATGAGCCTCTTCAAATCACATACAGCTACTGG GATGGAACTGGCCACAGGCGTGTGATCCAGGTACGCAAGGGTGACAGTATAGGAGAGTTTCTCAGAGCAGTCCAGCAGCAACTGGCTCCTGAGTTCCGAG AGATTCGAACTACATCAGTTGAAAATATGCTATATGTGAAAGAAGATCTTATCATTCCTCACCAACACAGTTTCTATGAGCTAATTGTGAATAAAGCTAG AGGCAAGAGTGGACCGGTATCTTCCTTTCCTTTTACTTCCCTTTATTTTAAAATTTCTTCCCTTCTAGATGGTGCTTCTCTAAGTGGTTTTCTTAAATTG ATAATAGATGATTGTAGTATTTTATTTTTGCTGTGAGGGCCAATTTCTTCCTCTTTTTCTTTCTCTAGAACAAGGGAAAGTACATTCAAAACTATATATT ATAAAGAATAGAACATATAATAAAAGAAACTATGTGGAGGATGGAGAATAGGTTCTTAGCTGCATACTGAAGGAGGAAAATAAGCAAAAATAAATAAAAA TAGAACATTGACCTATCATATTTAAGTTGGAGGAAGTTACAACGCAAAGCTGAGATTTGTACAACTGCTTACTAAACTAATACACCTACTTTGTTGTCTT TATTTTTTTATCTGGAGGGGTGCTCAGGGACTCCGAGAGTCCCTATGATGCTTTTGACACCTTAATGGTGTGACTTATTCAAATTACAGGCCATGCAAAG CAGAATTAAATTCCAATTTTTACATTGCATGATTCTTTGTGCTGCCTTAAAGTTATAATCATTGCTGATTAAGGATGATCCAATTTTTCTTCTCATGAAT ATATTTCCTTTAATTTCAAATCATAATTTCCATTGATGTAGAATGAATTTACTTACCCTCCATTAATGTTGGATACTCTTGTTTTCTTAATAGTTGTAAA TTGAGTCTTTCTTCTTTGGGTGGATTAAATTGATTCTATGGAAAAAAATTATACTAAACAGCAGAAAAAAAATTCAAATTTTATTTGGTTTTCCCTTCCT TGTAATAATAACTGCTGGTGTTTGCTTAGTAATGTATCATGCTTTGATAATTAATGTTGCTTTATATTATTTGTGTGAGTGCTTCTTCAAACTTGCATTC AATCCAAAATATCTCGGCCTTAAATACCATTTGCATGCCATCATGAACTCGAATGTGTTTCCCGGTTATCCTTTAATAATTCGAAGTGTCAATGTTGCTC ATTATTTTTCTGTATATACAGCTTTTTCATTTTGATGTGCATGAGGATGTCCGTACAACTGCTGACGCCA
• Tissue: pods
• Gene name: LI_gene_157312;
• Additional information: details;

Expression of Ll_transcript_422228

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 0
• PS2: 0.3
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_422228

• Blastp: Protein XAP5 CIRCADIAN TIMEKEEPER from Oryza sativa with 77.25% of identity
• Blastx: Protein XAP5 CIRCADIAN TIMEKEEPER from Arabidopsis with 88% of identity
• Eggnog: Family with sequence similarity 50, member(ENOG410XNXM)
• Kegg: Link to kegg annotations (4347694)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414268.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;