| Id Trinity | TRINITY_DN47993_c3_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_422235 |
| Sequence | AAAATAACTTTGCAGAGTTGGGTGGAGATTAGAACAGAGGAGAGGGTTCTGATTACAATACAAGTTCATCATCATCATCATGTCGGGTATGGGAGACGGG TACGTCGGCACCTCCCAAGACGCGGTGAGGATACGGCGGTTGGAGAAGCAGAGAGAAGCTGAACGCCGCAAAATCCAAGAACTCAAAACCAAGTCTGTCT CCGAAAAGGGCCAGCCTGGCCTCCTCCAATTCGGTTCCAGCACTTCTGAGATTCTAGAGACTGCGTTCAAGAAGGAAACTGTTGGTCTCGTAACCAGAGA GGAGTATGTAGAGAAGAGGGTTAATATTAAGACCAAAATTGAAGAGGAAGAGAAGGAGAAGCTTCAGAAGCAACAGCAAGAGGAGGAGGAGTTTCAATTG CAAAAGCGTAAGAAGAGGAAGATAAAGGGGAACTCTCGATTGTCATTTGCTGAGGATATTGAGAATGATGGTGAAGAGGAGGAAGGACAAGATACAGAAA ATCTGGAAACAAATAGACTAAGGCATGGTAAACTTGGTAAAGACCCTACAGTTGAAACTAGCTTTCTACCTGACAGGTATGGAATATCTCCTTTTTCTTT CTCTCTCTTACCCCTTCCCCCAATACCCCTCTCCTTTCTTTATTATTTGCTTCCCTAACGTTCGGGCATAGGAGTGCCGAGGATTCTGTAGTGAGCGAGA GGCTGAGGAGGAAGCTGAGCGTGAAAGACTGCGGAAACAATGGCTTCGTGAACAGGAGCAAATTCGAAATGAGCCTCTTCAAATCACATACAGCTACTGG GATGGAACTGGCCACAGGCGTGTGATCCAGGTACGCAAGGGTGACAGTATAGGAGAGTTTCTCAGAGCAGTCCAGCAGCAACTGGCTCCTGAGTTCCGAG AGATTCGAACTACATCAGTTGAAAATATGCTATATGTGAAAGAAGATCTTATCATTCCTCACCAACACAGTTTCTATGAGCTAATTGTGAATAAAGCTAG AGGCAAGAGTGGACCGCTTTTTCATTTTGATGTTCATGAGGATGTCCGAACAACTGCTGATGCCACTATTGAGAAGGATGAGTCTCATGCGGGGAAGGTT GTAGAAAGGCACTGGTACGAAAAGAACAAGCATATATTTCCAGCTTCAAGATGGGAGATATATGATCCAACAAGGAAATGGGAACGTTATACCATCCATG GAGATTGATTTGTGACTGCCATAAAACTTTCCTTTGCATTTGTTGTCTTATGATATTATTAATATATTAATGGACGAGAAAATTGCAAATTCTGTTTGAT TTATTGTTGAAATGACACTACATAATTTTGAAGAGTTAAAACTTGATGCGTATTTCACATTGTTAACAATTATGTGGTGCTATAATATTTTTGCTGCACA ATGATGGTATCATTGTTGCTTATTGACTAAAAGTTTATATATTTAAATCTTAGAAATAGTTTTCCTGTTTACAATTACAAGTTAAAGCTGTGTATATTTA CTTTTCTTAGACCTATTATAGGTGTGAGCCTCGTACACTTAAGCGTGTTTCTTATAGTATTGGAGTATGGTGACACCATGGCAGCAACATAGGCCACCTG GCAGCATCAAATTAGGTAACTCACCCTCGCGGGATCGCGATCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAAGGCATAAGGGGCATGATGACTT GACGTCATCCTCACCTTCCTCCGGCTTATCACCAGCAGTCTGCTCAGGATTCCAAACTCAACGTTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_157312; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_422235
| Blastp | Protein XAP5 CIRCADIAN TIMEKEEPER from Oryza sativa with 77.25% of identity |
|---|---|
| Blastx | Protein XAP5 CIRCADIAN TIMEKEEPER from Arabidopsis with 92.45% of identity |
| Eggnog | Family with sequence similarity 50, member(ENOG410XNXM) |
| Kegg | Link to kegg annotations (4347694) |
| CantataDB | Link to cantataDB annotations (CNT0001676) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414268.1) |
| Pfam | - |
| Rfam | SSU_rRNA_archaea (RF01959) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |