Ll_transcript_327205

• Id Trinity: TRINITY_DN48001_c0_g3_i1
• Name Transcript: Ll_transcript_327205
• Sequence: ATTTGGTATAAAAAGCAGTTAGAGATACTTATGGTCATTGTTTCAGAGGTGTTATATCTCTTTCTTCTCATCACTAACTAAGAATGAGTTTGAGTCGTAC ACACAAAAAATTAAAAAAAGAAAAAGAAATTATATTTTTAGATTTAGTAGTATTTAACTGTGGGAACTTTTGTTCGGTGGAACAGCTGTGGAAGCAATAA TGAAGTGTTTCTCAGTGCCCTTCGTCTCTCTCTGGCTTCTCCTTTCTCTCTGTATTCACAGTGTTTCATCACAGAATATATCTCTAAGTGCCCTGCAGCA AGCTAGCTTCCCGCCAAGAGGTTGGAATTCCTATGATTCCTTCTGCTGGACAATTTCTGAACAAGAATTCTTGGAGAATGCTGAACTAGTTTCTCAGCGT CTCCGTGCTCACGGATACGAGTATGTTGTGGTGGATTACCTCTGGTATAGAAAGAAAGTCAATGGTGCTTATCCTGATTCTCTTGGATTCGATGTGATTG ATGAATGGGGAAGGATGGTCCCTGATCCAGGGAGGTGGCCTTCTTCCGCAGGTGGGAAGGGGTTCACTGAGGTAGCTAATAAAGTACATAGAATGGGTTT GAAGTTTGGGATTCATGTTATGAGAGGGATAAGCACACAAGCCGTCAATGCAAACACCGCTATCCTAGATACAACAAAGGGAGGTGCTTATCAAGAATCT GGTCGAGTGTGGCATGCAAAAGACATAGCAATTCCGGAAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTAAATACAAAGTTGGGAGCTGGAA AAGCTTTCTTGAGGTCCCTTTATGAGCAGTATGCTGAGTGGGGCGTTGATTTTGTGAAACATGACTGCGTGTTTGGCGATGACTTGGATTTAAATGAAAT AACATATGTATCAGAGGTTCTCAGGAATCACCCCATTGTGTATTCTCTGTCTCCTGGAACCAGTGTGACACCAGCCATGGCCAAGGATGTCAGTTCACTA GTCAACCTGTATCGTATAACAGGAGATGACTGGGATACTTGGGATGATGTCAAAGCTCACTTTGGTGTAACAAGGGATTTTGCTAATGCTAATATGATAG GAGGAAAAGGTTTAAAAGGATTCTCCTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCAGGGTCAAATGAAGGTCCACACAGATATAG TAAACTCAATCTAGAAGAGAAACGGACACAGATGGCCCTATGGTCTATGGCAAAGTCTCCTCTTATGTATGGAGGGGATGTGCGAAACATCGATCCTACA ACATTTGATCTTATCACGAATCCTACCCTCCTGGAGATTAATTATTTCAGCTCAAATAATATGGAGTTTCCTTATGTCACAAGCTCAATGAACTCGAAGA GTGATGATCAACATCACGGAGGGAAAAAGGGAAGATCTAAGAGAGGAACTAAAACACCATTTACAAATTCATTACGTCTCACTGGTTGCACTGAATCCAA GGCAAGTGGTTGGTCTATTGAAAGTCTTAACCATGATGTTGAAAGAATCTGTTGGAAAAGTAGGTTAGAACGAAGGCATCAGACACCATTCTGCGTACAC AAGAGAGAACTTCGATTCAGATTAGACGGAGAGAGTATGTATCAAGAGGAGCATCAAGGGAAGCATCATTTAGTTGATACCAATAGAATGGAATTTTGCT TGGATGCTTCTCCGAAAAGAAAGCTTACTTCTAAGGAATTCAAGAGAGGTACATTTTCTCCTTGCAGATGGGATGCAAATCAGATGTGGGAGCTAAACCA GAACGGGACCCTGGTAAATAGCTATTCAGGCCTGTGTGCAACAGTAAAGCCTATGAAAGCTGATGTTAATTCTGGAGGGATCAGCTCTTGGATTGCAACA GGAAGAAAAGGTGAAGTGTATGTTGCTTTCTTCAATTTAAGTGAACAGAAGACAGTGATATATGCTAAGATATCAAATCTGGCTAAGGTTCTTCCTGGAA GAAGCTTCAATTCCTGTAAGGGCAAGGAATTGTGGAGTGGAAAAGACATAGGAACAAGGGGGGAGACATTATCAATAGAAGTGGAAATTCATGGAAGTGC ACTATTTGTTTTGAATTGCTATTAGATACTTTCTTCTACAAAATAATTGAAAGAATCTAAATTCCTACTAGTTTAGCTCCCAAATTTATTTTTCAAAAAT GTGAATCTCATAGTTGAGCCTTCATTTTTCTATTTATAGTCTTTGTTATTAGAGGGTAGATAATTTGAATGTTAATGAGGAACAAAATTGTTGGTCCTAG AAGATGTAACGCGTCCCGAAAAATACTCCTTAAAAATATTGTGGAAAAATGGGC
• Tissue: pods
• Gene name: LI_gene_157355;
• Additional information: details;

Expression of Ll_transcript_327205

FPKM

• PAB: 44.8
• PNAB: 30.4
• PS1: 38.8
• PS2: 53
• PS3: 43.1
• PW1: 39.5
• PW2: 22
• PW3: 12.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_327205

• Blastp: Alpha-galactosidase from Coffea with 26.36% of identity
• Blastx: Alpha-galactosidase from Coffea with 26.36% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0001220)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464188.1)
• Pfam: Alpha galactosidase A (PF16499.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;