| Id Trinity | TRINITY_DN48001_c0_g3_i12 |
|---|---|
| Name Transcript | Ll_transcript_327228 |
| Sequence | GGTTGAAGTGATTGTATGAAAAGTCTTATCATGTTCAACCATGAAGTGTTTCTCTCTATCTCTATGTCTTCTCCTCTGTCACTGTTTTCAAAGTGTGTCG TCTCAAAATGCATCTAAGAGTAAAAATCTACAACAAGCTACTATTCCACCAAGAGGTTGGAATTCATATGATTCATTTAGTTGGATAATATCTGAACAAG AATTCTTGCAGAGTGCTGAAATTGTTTCTCAGAAACTCCATGATCACGGATACGAGGTACAAGTACTCGAAAAAACCGCAGGTTATGACTGCTATTAGTA CATTCATTAGATATAGAATGATATCTTTCATTCAATACACTTGCAGTATGTTGTGGTGGATTACCTCTGGTATAGAATGAAAGTTCCGGGTGCATCTCAT TATTCGCTCGGATTCGATGTGATTGATGAATGGGGAAGGATGGTTCCAGACCCAGGGAGGTGGCCTTCTTCCAAAGATGGTAAAGGGTTTGCTGAAGTAG CTGATAAAGTACATAGCTTGGGTTTAAAGTTCGGTATTCATGTTATGAGAGGGATAAGCACACAAGCTGTTAATGCAAACACCCCTATCCTAGATATAAC AAAGGGTGGTACTTATCAAGAATTTGGTCGAGTGTGGCGTGCGAAAGATATAGCGATCCCAGAAAGGGCTTGTGCATGGATGCCTGACGGTTTCATGAGC GTAAATACAAACTTGGGAGCTGGGAAAGCTTTTTTGAGATCCCTTTATGTGCAGTATGCAGCATGGGGTGTTGATTTTGTTAAACATGACTGTGTATTTG GCGATGACTTGGATCTAAATGAAATAACCTATGTATCAGAGCTTCTCCGGGAGTTTGATCGCCCAATTGTATATTCTTTGTCTCCTGGAACTAGCGTGAC ACCGGCTATGGCCAAGGAAGTCAGTGGACTGGTCAACCTGTATCGTATAACAGCAGATGATTGGGATAACTGGGGGGATGTCAAAGCTCATTTTGATGTA TCAAGGGATTTTTCAACTGCTAATATGATAGGAGCAAAAGGTTTAAAGGGGAATTCGTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATC CCGGTTCAAATCAAGGTCCGCACAGGAATACTAAACTCAATCTAGTAGAGAAAACGACACAGATGACTTTGTGGTCAATGGTAAAGTCTCCACTTATGTA CGGGGGAGATGTGCGGAAAATTGATAATACGACATATGATCTTATTACGAATCCAACTCTTCTGGAGATTAATTCTTTTAGCTCAAATAATATGGAGTTT CCTTATATCACAAGCTTGAGGAGTGAAGATCCTCTTTGGTCGCCGATGAGAAGATCCAATGAAGAAATGAAAACAACATATACACATTCGTTAAGTTTCA CTAGCTGTGCAGAGTCAAAGGCAAGTGGTTGGAGTAGTGATAATATTGACCAACATGTTGAAAGATTTTGTTGGCAAAGGAGTTTAGGAAACAAGAATCT TGACCCTTTCTGTGTACACAAGAGAGAAATCCGCTTCACAATACATCAGGAGAGTATGTTTCAAAAGAATCATAGAGGAGAACATCATTTAGTTGCGACC GATAATGATAAACTTTGCTTGAACGCTTCTCCAAAACGAAAGCTTACTTCTCAAGAGTCTAGGAGAGGTTCATTTTCTCCTTGCAGATGGGATTCAAATC AGATGTGGAAGCTGAACTCTAATGGCACCCTGGTAAATAGTTATTCTGGCCAATGTGCAACAATTGAGGCTACCAAAGCTACTATTAATGTCGGTGGTTT TCGCTCTTTGATCGCAACCGGAGGAAAAGGAGAAATTTATGTTGCTTTCTTCAATCTAAGTGAACAGGAAAATGTGATATCTGCACAGATATCAGACCTG GCTAAGGTTCTTCCTGGCAGAGACTTCAATTCCTGTGAGGCCAGTGAAGTGTGGAGTGGAGTTGACATAGCAACGATGCATGCGACATTATCGACACATG GGACATTATCGGCGACAGTGACAGAGCATGGAAGTGCACTATTTGTTCTAAATTGCAACTAGTTTGGCCCTTCATAAAGAAAGAAGAAAAGAAAAATGGC ATGTCAATGCTATGTTTGGATTGATGAAAGTGTGATGAAACCTGTAAAGTGAAGACCCTTCTATATACCCTTTTGTTCTCTTTACATTCCACTATATTTC ATTTCATTGCACCCTTCTAATGATAGCATTGCTATGCTTATGAGTTATGACAATAAGTTTTTTTTACCAATGTTGTGGTATAAGTGTAATTACATAAGAA ATCAATTAAAGCCATTTTATATAAAATTATGGGTGGATTAGTTCATAAAATGAAGCACCTAGCAACATTTGACTCATGTCTATTCAGTAATTTATATGAT TCTTAAGTTAGGTAATGGTAGTTGTGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_157355; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_327228
| Blastp | Alpha-N-acetylgalactosaminidase from Mus with 26.9% of identity |
|---|---|
| Blastx | Alpha-galactosidase from Cyamopsis with 23.81% of identity |
| Eggnog | alpha-galactosidase(ENOG410XPF1) |
| Kegg | Link to kegg annotations (17939) |
| CantataDB | Link to cantataDB annotations (CNT0001220) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438348.1) |
| Pfam | Alpha galactosidase A (PF16499.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |