Ll_transcript_327206

• Id Trinity: TRINITY_DN48001_c0_g3_i2
• Name Transcript: Ll_transcript_327206
• Sequence: CAATTTACTCCGTTCAACATGAGGAAGAAGAACAAAACAAGTGGAACCAAAAACCCTCAATGATGAATAATTAGGAGGATGACCATACAACCTTTCAAAA GGAGACAAACTTGAAGTAACGGAAGAAGGAATTCTGTTATTGATATGAACCGCAGTTTTGAGAGCCTCACCCCAGAACTCAAAAGGAGCTGATGCTGAAA GAAGCATAGAACAGGCTGTTTCAAGAATCTCACGATGCTTTCTTTCAGCAACTCCATTTTGTTCAGGGGTGTCAGTACAAGAGGCTTGGTGAACTGTTCC ATCAGAGGAAAGTAACTCAGAGAATTTGTTAGAGGTGTATTCACCACCTAAATCGCAGCGGAAGCATTTAATAACAGAGTTATATCGAGTATTAACCAAA GCACGAAAATAGCAATAAATACCAAAGAATTCAGAACGATGTTTCATAAGAAAAATTCAACAATAACGGGTGTAATCATCAATGAAAGAGACATAATATT TTGATCCACTTTTAGTAGCAATTGGGGATGGACCCCATACATCAGAATGAACCAAATCAAAAGGTGTCTTAGAAATTGAAACACTCTTAGGAAAAGGTAA AGCAGAAAACTTGGCAAGTTTACAACCACAACAGTCAGAAATGTCATTTGGTTGTAATGATCCTAAGACTCCCGTTGATGCTAAGTATTTCAAACGAGGA GAAGATACATGACCCAGACGAGAATGTCATAAATTAAACTTAGAAGAAGACAAATTCAAACGAAAAGATGATAAATCAACTGTAGGAGCTGCAACATGTG GAAGCTTCAGTTCATCCAAAATATAAAGCCCCCTGTCTATGGCCTGTCCCAATCAGCCTCTTCGATTGAGGATCGTACACATAACAATGAGTTGAAGAAA ATAAGATTGAGAAACCAGAATCACACAGTTGACTAACAGAAGCAAGACTTAAAGTGAGGTTAGGTATATAATAAACATCAGAGAGAGAGAGTTTAGGTGA AGAAACAGAACCAACTCCTTCCAATAACATAGGAGTTCCATCAGTAGTCATAACATATACACAGGACGACATATGTACAGATGTAAAAGATTTAAAGTCA GATGACATATGATGGGACGCTCCAGAGTCAAGGATCCATATGGAGGATGATATACCTGATGAACCAGCAGAAGACAGACCTACATTAAGAGAGACTGACA TAGCATTGGGCTGCGATGCAAGAAACTTCTGAAATTGTTCTGCCATGTCAGACATGTTAGACCCAAAGTGAACCATCCCAAGGGTGGCAGATGGAGAAAC AGCAGTAGCAGCAGCAACATTGGAAGAGTGAGATGTGTGCTTAAAGTTCCTGTATTTCGACTGAGGCGGACGCCACTGAGGTGGTTGATGAGGTTGCTCC TTCATCAATAATTTTGGACATTGAGCCTTCCAATGACCCTTTTCCTTACAGAAGCTACATTCATCATAATTGACTCTCCCTTGAGATTTTCCTTTCACAA CAGGAGCAGCAAACACAGAGGGGTTTGGCAGAATCCCTTTGTCAATAATTCCCTTTTCAGAGTGGGACTTCAAACGAACTTCTTCAACTAAAAGTTCATT AACAACAGAGTCAACAGATGGCAGAGGAGTGCGATGCAAAATGGAACCGCGGAGGCCTTCAAAATCATTCCGAAGAGCCATCAAAAACTGTACTACACGT TGTTGTTCCCGACGATCAGTGTACGATGTGAATGCTTGCAATTCTGCAGATTCAGTGGGGTGCCAATTGGTCCCAAAGATTAGTCATAGCAGAATAAAAC TCTTGGATGCTCATGCTATGTTGTTGGAGAGCTCAAATATCAATCTCTAACTGATATTGTTTTACAAAATTGGACTGCACATACAATCGTTTAAGGTGCT CCCAAACCTGAGATGCTGAATCATATTTTGCAAGTTGAAAACCAATAGATTGCGAAACAAAATTATTAGTCCAAGTAATAATTTTTGAGTTGTTCACTTC CCAAGTGTCTAACTCGTTTGCATAATTTTCAGTAGCACTATTTGTAGGTTTAACAAAAGTTCCAGAAACATATCCCACATTCGTTTACCAATCAGAAAAA TTTTCATCACATAACTCCAATATGCATAATTGGATGATCCATTTAGTTGCACACTAATGGATTGCGAAGAATCATCTCTTTCAGTTGCCATAACTAACAA GCACAACAAAAGGGAAATCGAAATTCAAAGGGAAAGAGAAACAAAAAAACCTAAATTGCGATCTGCGAACTGCGGAGGCTGATCTACCACGCGAAAGCTG TGGCCTTAGCAAACCTTGCTCTTGATACCATGTTAGATTAGTTGCATAGGAAGAGAGAAGGGAAAGGAGAAGAAGAAGAGAGAAGGGAGAGGAATGTAAT ATGGAATTGATAATGGAGATAAGGCCAAAGGGCCAATACATATAGGAAGTTAGGAAAATACAAAAGACAAGACTACCCTTTGCTAATAACTAAAATACAG TTAACACACCCTAGATACTATTGTCTCTTCAGCCTTGCGCCTATTTTGGTTGCGAATTCTATGCAAGCCCGCTAGAGATGCTCTTAACTACTGCGTAATT TTTTATTTTTTGCAGTTCGTCTAGTGTTGATATAGAAAAATAATTCATACATTCAGTGATCATATTTGTCTTTGCATACCATTATTTTTACCAAATCTTG GTATCTACATTGGCCAATTTGTATTTTATTCATACTTCATAGTAATATTTGTGGACAATATTTGAAGCCAAGGGTCACTTAATGAGACCAAGGGTCAGTT GTTGTTGTATATTTGAAGCTGATCTATCAAGTGTTTGGCAGATGTGGGAGCTAAACCAGAACGGGACCCTGGTAAATAGCTATTCAGGCCTGTGTGCAAC AGTAAAGCCTATGAAAGGTGAAATTTTGTGAACATGCACCACTTTTTAGATTTATTTTAATTTAAATTTATTACTCAAAATGCCAGTTGGTAATTCATGC AGCTGATGTTAATTCTGGAGGGATCAGCTCTTGGATTGCAACAGGAAGAAAAGGTTTGTTTCCACCAAACACTAAAATATGATTAGCCATGAAATTTTAA ACACTTCATAACATAAATTTATATAATGGCCAACTAAGCACCTTCTATGAAGCTATTATTTTCTAACACATAATGTTGTGTATCTATTTAGGTGAAGTGT ATGTTGCTTTCT
• Tissue: pods
• Gene name: LI_gene_157355;
• Additional information: -

Expression of Ll_transcript_327206

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.5
• PS2: 1.2
• PS3: 0.3
• PW1: 0.5
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_327206

• Blastp: -
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 38.21% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427158.1)
• Pfam: Zinc knuckle (PF00098.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;