Ll_transcript_327215

• Id Trinity: TRINITY_DN48001_c0_g3_i4
• Name Transcript: Ll_transcript_327215
• Sequence: GAAAGCTTACTTCTAAGGAATTCAAGAGAGGTACATTTTCTCCTTGCAGATGGGATGCAAATCAGGTATGTTGTAGTCCATTTTTCATGATAAAGAATAG CATATGATGATTATGATCCTTTTTCATTAGGAATAGAACCCTATGTATGGCATTGAAGTATCCACTAAGCCTTTGGAACATCTCCAACCATGGAACTCTC TTCAGTTGTGTTATATGGGCCATAACATATCACCTTATCTATCTTTACTTTATATAATAACAACTCTACTCCAATCATACGACTCTTAAAAAGTTCATTA AATAGGGGCAACAATTTATAATTAAGTATATATTTCTCTTATTTATCTTTATATATTTCTCTTCTTTCAACTTAAAGTAGTAATTCATTTCTATAATTAA GTATATGAAGCCTATATAAACTTTGCAACATTTGTTTGGCTAAACAATGTTGCATGCGCCCTGTTAGATCAGCTGCATAGGAAGAGAGAAGGGAAAGGAG GAGAATAAGAGAGAAGGGAGAGGAATGTAATATGGAATTGATAATGGAGATAAGGCCAAAGGGCCAATACATATAGGAAGTTAGGAAAATACAAAAGACA AGACTACCCTTTGCTAATAACTAAAATACATTTAACATTCCCCCTCAAACTCAAGATGCGTTAATCGAAAGCATCGAGAGTTTGTTAGTCAAGAAACGAA AACGTTGAGTAGAATGAGTTTTGGTAAACAAATCAACAATCTGCAACGAAGAACAAATGAAGGGTAAGGTGATGGTGCCATGTTGGAAGTGGTGACATGT GAAGTGATAATCAATCTCTATGTTTAGTACGCTCATGAAAGACAGAGTTATGAGCGATTTGAATAGCACTCTTATTGTCACAGTACATGGGAGTGGGTTC AGGTTGATCAACACCCAGAGAAGCAAGTAACCAACACAACCAAACTATTTCAGCAGTGGTGGTTGCCATAGCACGATACTCAGCCTCTGTAGAAGAGCGA GAAATAACATCCTGCTTCTTACTCTTCCAAGATATGAGAGAGTCTCCTAGAAAGATACAGAAACCTGTAGTAGACTTGCGATCAGTAGGATCCCCAGCCC AATCAGCATCTGAATAAGCAGACAATGTCAAGGAAGAAGTTGAAGAGAAAAGAAGACTCTGAAACTGAGTGCCTCGAAGATAACGAAGCATCCGAAGAAC AGCTGCCCAATGAACAATAGTAGGAGAACTCACAAACTGGCTAACAATGTGCACTGCATAAGCAATATCGGGTCTGGTAATGGTCAGATACACCAAACTA CCAACAAGAGTGCGGTATAGAGTAGGTTCAGAGAGAGGAACACCATCATAAGATGTATATCTAGCATTAGTCTCAAGAGGACTGTCAACAACTTTAGTGT CAGAGAGACTAACCCGGTCAAGAATATCTGCAATATATTTCGATTGGGAAAGAAGATAACCCCTAGGAGATGAGGCTACTTCAATTCCCAAGAAATATCT AAGAGTACCTAAATCCTTCATCTCAAATTGTTCTACTAGTTGCGTCTTCAACTTTGTAATCCCATCAACATCATTACCAGTAATGATCATATCATCGACA TATAAAGAGATGATAATGCAACCATGAGGAGTATTTCTGACAAATAAAGCAGAATCATATGGACTTGAAGAGAAGCCAAGAGAAGTTATCACAATAGAGA ATTTCTCAAACCAAGTGCGAGGAGCTTGTTTGAGCCCATAGAGAGATTTTTGCAGCTTGCATACTTCCCTCGGATTATGAGAAACTCCAGCAGGAGGAAC CATATATTTCTTCATGAAGATCACCATTGAGGAAAGCATTTTTGACATCCATCTGAGAGATATGCCATTGACGAACAGATGCAATAGCAATAAGAGTGCG AATAGTTGTCATCTTGGCAACAGGAGCAAAAGTTTCTTCATAATCCATGTCATATTGTTGAGCATATCCCTTGGCAACAAGACGAGCTTTGTAACGCTCA ATAGAACCATCAGACTTGATCTTGATCTTAAAGACCCAACGAGAACCTATAGCACGTTTCTCTGGTGGTAGAGACACCATAGTCCAAGTACCTGTTTGGT GCAAAGCAGAAAGTTCATCGTCCATAGCCTGCTGCCAAAGAGGATCAAGAACAACCTCTTGATAGGAGGAGGGCTCAGATAACCTGTGGAGAGAGGTCAA AGCAGAAGCAAAAGAAGTAGAATAAATGTTGTAAACAAAGTCAGGTAGCTGAGTGGACTTATGGATACGTTGAGGATAAGGACGAGGAAGAGGAGGTGGT TGAGGATGAGGATCACCAATCTGCAGAGGGTCATGGGCAACAAACAGATCAATATGAATGAGATCAGACCTGGTAATGTTTTGAGAGTCAGATGGAATAG AATAAAAAGGCAAATGCTCAAGAAAAACAACATGACAAGAAATATACAATTTACGAGTAGAAGGATTATAACAACGATAACCTTTCTGACCATCCCCATA ACCAAGAAAGACACATATGGCAGATCGAGGAGTCAATTTACTCCGTTCAACATGAGAAAGACACATATGGC
• Tissue: pods
• Gene name: LI_gene_157355;
• Additional information: -

Expression of Ll_transcript_327215

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.4
• PS2: 0.5
• PS3: 0.1
• PW1: 0.2
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_327215

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 42.27% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 41.98% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439031.1)
• Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;