Ll_transcript_327217

• Id Trinity: TRINITY_DN48001_c0_g3_i6
• Name Transcript: Ll_transcript_327217
• Sequence: ATTTGGTATAAAAAGCAGTTAGAGATACTTATGGTCATTGTTTCAGAGGTGTTATATCTCTTTCTTCTCATCACTAACTAAGAATGAGTTTGAGTCGTAC ACACAAAAAATTAAAAAAAGAAAAAGAAATTATATTTTTAGATTTAGTAGTATTTAACTGTGGGAACTTTTGTTCGGTGGAACAGCTGTGGAAGCAATAA TGAAGTGTTTCTCAGTGCCCTTCGTCTCTCTCTGGCTTCTCCTTTCTCTCTGTATTCACAGTGTTTCATCACAGAATATATCTCTAAGTGCCCTGCAGCA AGCTAGCTTCCCGCCAAGAGGTTGGAATTCCTATGATTCCTTCTGCTGGACAATTTCTGAACAAGAATTCTTGGAGAATGCTGAACTAGTTTCTCAGCGT CTCCGTGCTCACGGATACGAGTATGTTGTGGTGGATTACCTCTGGTATAGAAAGAAAGTCAATGGTGCTTATCCTGATTCTCTTGGATTCGATGTGATTG ATGAATGGGGAAGGATGGTCCCTGATCCAGGGAGGTGGCCTTCTTCCGCAGGTGGGAAGGGGTTCACTGAGGTAGCTAATAAAGTACATAGAATGGGTTT GAAGTTTGGGATTCATGTTATGAGAGGGATAAGCACACAAGCCGTCAATGCAAACACCGCTATCCTAGATACAACAAAGGGAGGTGCTTATCAAGAATCT GGTCGAGTGTGGCATGCAAAAGACATAGCAATTCCGGAAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTAAATACAAAGTTGGGAGCTGGAA AAGCTTTCTTGAGGTCCCTTTATGAGCAGTATGCTGAGTGGGGCGTTGATTTTGGTACTGGGACTACTAATTTACAATCAAGCTATTTTGCACTGTTGCA GCATTTATCATATCATAGACAACACAACCCACTTCTTACATATATTTTCAGCTGTCTGCAGAATCATTTCTCATCTATTCTAAACCTCTAAAAATGAGTA ATTATGTAAAGCATTTCTTGATTCTTTGTCCATTTGTTAAATTAGGACTTACATGAATAAGAAATTATAGATTACTGAGTGGTCTCTTAACTGAAGATTT GCACTATTGTATATGATCATATAAGAATTTTTGCCTATGCTTTGGCATCAATTTTGTTAATCATTTGCTTTCCTTGCAGTGAAACATGACTGCGTGTTTG GCGATGACTTGGATTTAAATGAAATAACATATGTATCAGAGGTTCTCAGGAATCACCCCATTGTGTATTCTCTGTCTCCTGGAACCAGTGTGACACCAGC CATGGCCAAGGATGTCAGTTCACTAGTCAACCTGTATCGTATAACAGGAGATGACTGGGATACTTGGGATGATGTCAAAGCTCACTTTGGTGTAACAAGG GATTTTGCTAATGCTAATATGATAGGAGGAAAAGGTTTAAAAGGATTCTCCTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCAGGGT CAAATGAAGGTCCACACAGATATAGTAAACTCAATCTAGAAGAGAAACGGACACAGATGGCCCTATGGTCTATGGCAAAGTCTCCTCTTATGTATGGAGG GGATGTGCGAAACATCGATCCTACAACATTTGATCTTATCACGAATCCTACCCTCCTGGAGATTAATTATTTCAGCTCAAATAATATGGAGTTTCCTTAT GTCACAAGCTCAATGAACTCGAAGAGTGATGATCAACATCACGGAGGGAAAAAGGGAAGATCTAAGAGAGGAACTAAAACACCATTTACAAATTCATTAC GTCTCACTGGTTGCACTGAATCCAAGGCAAGTGGTTGGTCTATTGAAAGTCTTAACCATGATGTTGAAAGAATCTGTTGGAAAAGTAGGTTAGAACGAAG GCATCAGACACCATTCTGCGTACACAAGAGAGAACTTCGATTCAGATTAGACGGAGAGAGTATGTATCAAGAGGAGCATCAAGGGAAGCATCATTTAGTT GATACCAATAGAATGGAATTTTGCTTGGATGCTTCTCCGAAAAGAAAGCTTACTTCTAAGGAATTCAAGAGAGGTACATTTTCTCCTTGCAGATGGGATG CAAATCAGATGTGGGAGCTAAACCAGAACGGGACCCTGGTAAATAGCTATTCAGGCCTGTGTGCAACAGTAAAGCCTATGAAAGCTGATGTTAATTCTGG AGGGATCAGCTCTTGGATTGCAACAGGAAGAAAAGGTGAAGTGTATGTTGCTTTCTTCAATTTAAGTGAACAGAAGACAGTGATATATGCTAAGATATCA AATCTGGCTAAGGTTCTTCCTGGAAGAAGCTTCAATTCCTGTAAGGGCAAGGAATTGTGGAGTGGAAAAGACATAGGAACAAGGGGGGAGACATTATCAA TAGAAGTGGAAATTCATGGAAGTGCACTATTTGTTTTGAATTGCTATTAGATACTTTCTTCTACAAAATAATTGAAAGAATCTAAATTCCTACTAGTTTA GCTCCCAAATTTATTTTTCAAAAATGTGAATCTCATAGTTGAGCCTTCATTTTTCTATTTATAGTCTTTGTTATTAGAGGGTAGATAATTTGAATGTTAA TGAGGAACAAAATTGTTGGTCCTAGAAGATGTAACGCGTCCCGAAAAATACTCCTTAAAAATATTGTGGAAAAATGGGC
• Tissue: pods
• Gene name: LI_gene_157355;
• Additional information: details;

Expression of Ll_transcript_327217

FPKM

• PAB: 0.2
• PNAB: 0.1
• PS1: 0.4
• PS2: 1.9
• PS3: 0.5
• PW1: 0.4
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_327217

• Blastp: Alpha-galactosidase from Cyamopsis with 31.9% of identity
• Blastx: Probable alpha-galactosidase B from Aspergillus with 31.71% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0001220)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464188.1)
• Pfam: Alpha galactosidase A (PF16499.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;