| Id Trinity | TRINITY_DN48002_c0_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_327328 |
| Sequence | CACTACTGCACACAACTGTGATATTTCTGTTAATAACAATGCTGTCCATAATGCTTCTGTTAGTAATAATGCTGTCCAGAATGCTTCTGTTAATAGCAAT GTTGTCCAGAATCCTGCTGTTCCCACAGAAACAGAGGCTATTGGCACATGTGAAGCTGAGACAGACACGTTTGACATACAAGAGGATGGCACAAGTCAAG ATAATGAGCCTGCCCTCAGAAAATCCCTTAGAGTAAGATCAAGGCCCCAATATCTGCAGGATTATCATTGTGCATTAAACACCTCTACTTCTAATTCTGT TCCAGCAAAACATTCTCTGGTCAGGTACCCTCTATCCAATAGCATTTCTTATAACAAACTCTCTGACACTCACAAACGTTTTTCACTTGCAATATCCTCT TTTAATGAACCAGAAAGCTACACAGAAGCAATTAAGCATGCTTGTTGGCAAAAGGCCATTCAAACCGAACTTGATGCCCTTAAGGCAAACAATACCTGGA CTTTAACTACACTTCCTAACACTAAAAAGGCTATAGGATGTAAATGGGTTTTCAAACTCAAATATAAGTCTGATGGCACAATAGAAAGGCACAAGGCAAG ACTTGTTGCCAAAGGATTCTCTCAAACCGAAGGGCTTGATTATTTAGAAACATTTAGTCCTGTTATTAAAATGACTACCATTAGAGCCATCTTAGCCTTA GCTGCTGCCAAAAATTGGCATTTGTATCAATTAGACATTAATACTGCCTTCTTGCATGGTGACTTAAAGGAAACAGTTTATATGAAAATTCCCCCAGGCC TAAACATAGAACATTCAGGTTTAGTTTGTAAACTTCAAAAATCTTTGTATGGTCTTAAACAATCTAGTAGGCAATGGCATGAAAAATTAACTAGCACTTT GATTGAAATTGGTTATGTTAAATCCTCTGCAGATTATTCTTTATTCATTAAATCCACTAATTCTGATTTTACTGCTATATTAGTATATGTAGATGATCTT ATTCTGGCAGGGAATAGTATTTCTGAAATCAATCATGTTAAACATATTCTAAATTGCAAATTCAGTATCAAGGACTTAGGGCAATTAAAATATTTTCTAG GAATTGAAATAGCAAGATCTACTAAAGGTATCTTACTTTATCAAAGAAAATATATCCTTGATTTGCTAAAAGAAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_157363; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_327328
| Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 35.62% of identity |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 43.82% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_015972360.2) |
| Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |