Ll_transcript_327617

• Id Trinity: TRINITY_DN48012_c2_g1_i2
• Name Transcript: Ll_transcript_327617
• Sequence: AGCTCGCCACCGCTCTCCGTAAGGTACGCCCTCTCTCTCTCTCTCTCTGTCGTCCACACTCGCCAAACCCTAACTGCCATCTTACACGCACTCTTTGATC CACCTTGGATACGATATGATCTCAATGATAACATGTTTTCTTCATGCAATCTCCATTCCACTTTGTATTGCTTTTTTGGGTAAATATTTATAAAGAACGC AATATAGTACAAGCATAAATAGCCGAGGAAAATGGCCCTTGGTTTGGGTGGAGGTATGTTTCTTCAGTTGTAATGGTTTTTGCTTGTGCTATATTTCAAT CTAGGTAAGGTGAATATTTTGACTCTTTGCAACTGGATGGATGCACAACCTATTTCAAATCACTCATCAATAAGTCCTTATGTATTTAGCTGTGGGAAAT GGAATTTATGTAATACCTTGATGATGGGTATGATACCCAAGGCGAGTTGTCAAGAATTAAGAAAAAAATTATCAACAAGGTATTGGTCTAGTGGTAGTGG TGTAAGGTTTTGTTAGATACTCAGAAATGTATTAGTTCCTTGTCGGGTTAGGGGATATCCTTGGTAGTACCAAAAAACAACTAATTAAATGTTTGACAAC TTTACCTAGGTACTGTAGCATTTGCATGTGATTATGTTTGCTTCTCCTGTTCTGTTGCATTCTTGAAGGGCTTTCCATATTCTCATATTCTTAGCATTCT TACGCTGTTGGCAACTGGTTCTGCCCATTAAACAGCTTGCTGAAATGTGTAGTGCTATTCACTATGAAGCGTGTATACTTTAATGTCCTTCAGGTATCCG ATATGTACCCATAGAGCATCAAAATTATTTTTTAAAACATAAATAAATTATAAATAGGATATTTTCAGGATACTCTCTGATATATTTAGAGTGCTTTTGA ATACCTCTCCAAACACCCAAACTACCATGCAGAAGCATTTTAAGAGAGACAGAAAAGTATAACATACAATCATTTAAGAGATAAACATAACATTCAATCT ACCAAGTGGAATTGTAGGGAGAGAGAAAAGACAAAACATGTGTATTGCGTTGAGAATGAAGAAAAAATGGAGCTGTATAATTATGATAAGAGATTTATGG GCAATAAGCAACGATTTCTCATGGACAATATGATTTTCATTTTTACTTGGAATTCCAGAGCAATTATATGTCTATCATGTGTAACATAGACGTACTGTAT TGTGCATTTTTTTCAAGAATACATGCATTAACATATCATATACGTATCGTATCCGAAACTTGTATCAAACACATACCCAGAGTCCAGACTACAGAAATTT ATTGACCCATAGGGGTAGAAGCAAAAAAGAAGTTAAAATGACATTTCTTTGTTCAAGCTTTTTGAGGTTTGAATGTAATGCATGTATTAAGATAAAATCC TAGGCCGTTGAGTGTTTTACCATATGGTTGCTCTATTGTGCAGCCTTAACTATAGGGCACTTCAGTTAAGCCTCTAGAGGTTACATTTAATGCTTGAGTC AAAGTGGCCTTTACATGCATATATTTGTTGATTAGATGTAATTGATTAGTCATATTGCATTTTGATTTTGGATATTGAGTTTTTTTTTGTGATATTGGTT TTCATCAGAATCCATACTCCGTGAATGTCCTTCTCGCTGGTTACGACAAGGAGACTGGCCCTTCACTCTACTACATTGACTACATTGCAACACTTCACAA GCTTGAAAAGGGAGCTTTTGGTTATGGCTCCTATTTTTCGCTGTCATTGATGGACAGGCACTTCCATAGTGGAATGTCGGTGGAAGAGGCAGTTGATCTC GTAGATAAGTGCATTCTGGAAATTAGATCAAGGTTGGTTGTGGCACCTCCAAACTACGTGATCAAAATTGTTGACAAGGATGGGGCAAGAGAGTATGCTT GGCGCCAGTCCGTTAAGGACACTCCCGCTCCCACAGCTTAAAAATAACTATGTTCCTTGTCTTTGATTGAACTTATCTAAATTTGCCCATTATCTTTTAT CTTTTCACTTGCTCTTACTGTGGTCTCTCTGAAAATCATGGTCTCTAAATGCTTGAAAGTAAGACAGTTTGTGTTTTGAATTTATATGTATGATGATTAG TTCTATTCAGAAGTAGCATTGTGACAATTTATGAGGCTTGCCTGATTTTAGTCCACCCCAAGTTGGGAATTCTGAAAATTGGAGAAATAGATAAAGTGCT TGAAATAATACAGGACTTATGAACTGTTAAATGACCCGGTGAAAATTGGGAGGATCATTGATGAGGTTGCTGATTTCATGTGCCTTAAATATGATACAAA TCCAATTAGATCTTTCCTAACGTTATAGTTACTATGCCTTAATACGCCCCAAGATCTGGATTCATCTTTCCTCTCAAGTTAATTTTGTTGTAAGTTTAAA ATCTGAATAATGTTATATCTTCCTACTAATCCTCTTGTCCACAAAAAAAGTGACAAATGTCATTTGTAAACCAATTATTAATAACTAAAGTATCATTTTG
• Tissue: pods
• Gene name: LI_gene_157465;
• Additional information: -

Expression of Ll_transcript_327617

FPKM

• PAB: 0.9
• PNAB: 0.8
• PS1: 0.5
• PS2: 0.7
• PS3: 0.8
• PW1: 0.2
• PW2: 0.6
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_327617

• Blastp: -
• Blastx: Proteasome subunit beta type-2-A from Arabidopsis with 82.41% of identity
• Eggnog: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(COG0638)
• Kegg: Link to kegg annotations (AT3G22630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444570.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;