Id Trinity | TRINITY_DN48013_c0_g1_i13 |
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Name Transcript | Ll_transcript_327181 |
Sequence | TTTACAATGACATAATATAGATTCTACACATAATAAATAACTAAAGAAAATGAAATAAATAAAGGTGGTGGAGTTGGCCAAGTCTTGAACTTGAAGTATA ATCATCGTGCATGCAATTTGTGCCTCTTTCTCTCTCTCTCTCTCTATTTTTTCTCCTTTCTTATATTTCTGCATGCACACGCCTTCTCTCTCTTTCTCTC TCCGTCTTCGTTTTCTCTCTCTCCGGTCACCGTCAATTCAAATTCAACCGTTTTCTCTGTCTCCGGTCAGATTCCGACCACTTTCCGATCAACACTCCCT CCACCTCCGCAAATGCAAATCCAAAACCACACCACCCGCCGCCACAGCTTCTCTCTCTAAAAAAATCACTGAACAACGAAACTGCTTCTGATTAACTTCA ATTAACCGCTACCACCAACTCCACCTTCGTTCTTCGGTTTAATTTCGTGAAGTGGAATTGAGGTTGAAAATGGAGTCAAGGAGTTGTATGAACGTGGCGT GTGCCGCCACAACGTCGATCCGGTGGCGCAAAGGTTGGGCCTTGCGGTCCGGCGAATTAGCCGAGCTATGTGATAAGTGCGGTTCTGCTTATGAACAATC AACATTTTGTGATTTGTTTCACTCAAACGATGATGGTTGGAGAGAGTGCACTCCATGTGGAAAGCGACTCCATTGTGGATGTGCTGCCTCTTTGTCTCAG CTTGAGTTACTAGATCTGGGTGGTGTAAGCTGTATAAATTGCGCGAAGAATTTCGGAATTCAACCTGTGGCAACTACTGAAAAGACTAATGGATCTGGGA CATCAAAGGTAAAAAATGTCAGTGAACAACATTGCATATCTCTGGCTAACCAATTAAATGCGAGGGGTATGCAATTAGGGCATTATGCAGAGAGCGATGG GCTGAGGTGCTGGCTCAAAGCACATAATAATGTTGACACAAGTGGGACTTCTGCAGAAATGAAACTGGAAGAAGTTTCACCTTCGGTTGAAGATATTGGG AACACTTTGATATCACAATTTCGTCGTGAGTTTAATGGATCATCTAAGGCTGCCAAAGCAGACAACAATAAGTCAGACATGGAAAGGCGAGATATATATG AATCATTGGCACAGACAAATTTGAGTATGACCCTTGCTACTCCATTAGGAAACTCAAATCCCTTTCAGAGAGCTATTGTTGTTGAAAGGGAACAAAGTAA AACAGCGCCTCCACTTCTGTCAGGGTCTAGGTCTCGCCATCTATTACCTAAGCCCCCTAGGTCAACTCTTGCTGTGGGCTTAGAAGCAAATACAGGCATG CAATCCCAGATTCGTGTAGCAAGGCCTCCTGCTGAAGGACGGGGAAGGAATCAGTTACTTCCGCGTTATTGGCCTAGGATTACAGATCAAGAGTTGCAGC AAATATCTGGAGGTTCAAATTCCACCATCGTGCCACTCTTTGAGAAGATGCTTAGTGCAAGTGATGCTGGTCGAATTGGTCGCTTGGTTTTACCAAAAGC ATGTGCTGAAGCCTATTTTCCTCACATCTCTCAAGCGGAGGGCCTTCCTTTGCGAATCCAAGATGTGAAGGGAAAAGAATGGGTGTTCCAGTTTAGATTT TGGCCAAATAATAACAGCAGGATGTATGTTTTAGAAGGTGTAACTCCGTGCATCCAGTCAATGCAATTGCAAGCTGGGGATACTGTAACATTCAGCCGTA TGGACCCTGAGGGGAAACTTGTGATGGGGTTTAGGAAGGCAATTAATTCTTCAGCAGTACAGGACGCTCATCCATCTACTGTGCCCAATGGTTCTCATTC AATTGAAACTTCCTACTCTGGTGTTTATGAGAATTTACCTATATTAAGTGGTTCTGGCCTTCTTCAGTCACAAAAGGGAAGTTCAGAGACCCATCTACAT ATGCTGTCTAAAGAATGGAATTCAGCTGGTGGTGACATGAACTTGCACAATATTGAGATGCCTGAAAGCAGGAAAAGAGAGGGGATGCTTTTCCCAGCTA TGATGGTTCCTGAGAAGAAGAGAGCTCGAAATATTGGGTCAAAAAGTAAGAGATTGCTTATTGAAAGCCAGGATGCACTGGAGCTGAAACTTACATGGGA AGAGGCTCAGGATTTGCTACGTCCATCTCCAACAACTAAGCCAAGCATTGTAATGATTGAAGATCATATATTTGAAGAGTATGAAGTAAGTAAACTATTT ATAGGAATTAGTAAATTTTATAAAGTTCACGCATTTTATTGGTGAATTCTTTCTATTGGAATTTTTTGATTCTCATCATGGGTAAGATGAAGTTGGTGTT TTTAGGGTCTGTTTATACCAACTTTCCCCCAAAAGTATTGGAGTGTTTAGGTATTTCTGATGAATAATGCATCTTTCTGCTACCCAAACATTTCCATCTA GGCGAATATAAATCGAAAGAAGAAAATATGACâBLAST |
Tissue | pods |
Gene name | LI_gene_157473; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_327181
Blastp | B3 domain-containing transcription repressor VAL2 from Arabidopsis with 50.34% of identity |
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Blastx | B3 domain-containing transcription repressor VAL2 from Arabidopsis with 50% of identity |
Eggnog | B3 domain-containing protein(ENOG410Z235) |
Kegg | Link to kegg annotations (AT4G32010) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464098.1) |
Pfam | B3 DNA binding domain (PF02362.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |