| Id Trinity | TRINITY_DN48015_c0_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_327730 |
| Sequence | GTAAAGACAATGTCTTGTGATCTTCATCTTCATTTCTTCTTGATTGGGTTATGTCATTGATCTTCAACATATTTGTGGGAGTGCCTTGAAATCAAAACAA GCTCTCCCAAACCCCACAAAATTTCAATGGGAAGAGCTTTTGTGTATGTCATTCTTGGTGGTGGTGTTGCTGCTGGTTATGCTGCCCTTGAATTCGTTAA TAGAGGCATCTCCAATGGCGAACTTTGTATAATTTCTCAAGAACCAGTTGCTCCTTATGAGAGACCTGCATTAAGCAAAGGTTTTTTACTTCCAGAAGCT CCTGCTCGCCTTCCATCCTTTCATACTTGTGTTGGTGCAAATGAGGAAAGATTGACTCCAAAATGGTATAAAGAACATGGTAATTATATATAATTTTTTT GTTACGATGTATTTTTATTTTGTTTGAATATGTTCTGTGGTAGTTTTTATCCTGCTTATGCCATATTTGACAATTAATGCTATCAAGCATGAAGACCTGG TTTGACAATTGGTGCATCCAGATCAAAATTTTGCAGGAACGAATCAACATATTTTGAGTAGAAGGTTGACAAGATGAAAAAAGTTCACTCGTTCTAAGAT CCGTTGTGTTTTAGAGTCAATGATTGTGGTAAAATGATTATTCTAGCTTAGAGGCTGATGGGGGGGGGGGCAATTAATGCTTAACGTTCTGTAATGTCAC TGCTGAACTACTGCTTTGAATTTGTTACATTGTTTCATCATATCCACTTGCATCTGATGAGAAGCACTTCTGTGTAAGATGCTACATTTAACTTAAATCA TCCTTTCGTTAGTTTCTTACCCATATGGTGAGGGGATACCCGTGGTTACACCAAAAAAATCAATTTATTAGTCTGTGTTCAGAAATTTTAAATTTTATTC GTGAACATGGTATGAAGGTTGTTACTGATTGACTTTTGTTCTTAACTTCTTTTTTGAGGGGGTGTCCCAAATGTTAAATTTTGGGAAAGCCTTCTCTTTG TCTTTCTCTGCAACTCGAAGTAAGAATAGAAGTTTTGTTTTTTCTGTTTTGAATTTCTTGATATTGTCATAAGTTAATGATACTATTTTGGTGAACCAAA GTTCTAGCTTGTTTGCTAAGTGAACAATAATATTTCCTCTCCCAAATATCTTATTCTTGAAATTGTTATTATTTTTTGTTTCAGGAATTGAATTGATTCT CGGAACCGCAGTTAAGTCTGCTGATGTGAAACGTAAGACCTTATTAACAGCAACTGGCGAGACCATAAGTTACAAGATTCTTATTGTTGCCACAGGTGCT CGGGTATCAAAACTAATCTCTCGTCGAGAACATTCTTAGCATAGATCAATGTGCTTATCTTACTAAATAATTTCATGCCATGCATTTTCATAGAACAAAA TGAAAGGAGTTTTGACCTTCGGGAATTTGCTGCATGAAGCAGAGGACCAAGGAATATTATATTTTCTCTTGAACTAATGTATCTTCTTAACGAATCATGA CCATCCCAAATACTAATTTTGGAATGACGACAATTATTTCATCAAGTTACTTTAGTACTCGACTTCGCTTTATTTACAGTAGTAAAAACATGTGCAATGT CGTCTTCAGGCTCTGAAGCTTGAAGAATTTGGTGTGACCGGATCAGATGCAGAAAATGTCTGTTATTTACGAGATATAGCGGATGCAAATAGGCTTCTTG ATGCTATGCAATCTGCTCCTGGGGGAAAGGCTGTTGTCATTGGTGGTGGATACATAGGCATGGAGTGTGCTGCATCTTTAGTGATCAATAAACTAAGTGT AACAATGGTGTTCCCAGAAACACATTGCATGGCTCGTTTATTAACACCAAAGATTGCAACCTACTATGAAGAGTATTATAAATCAAAAGGAGTAGAGTTC ATCAAGGGAACTGTGCTTTCATCATTTGATTTTGACTCCAATGGAAAGGTCACAGCTGTTAACCTTAGAGATGGAAGAAAGATATCCGTGGACATGGTTG TGGTGGGAATAGGTATACGACCCAATACAGGACTCTTTGAAGGCCAGCTTACTTTGGAGAAGGGTGGAATCAAAGTGAACGGAAAGTTGCAGTCCAGCAA CAGTTCGGTCTATGCAATTGGAGATGTTGCAGCATTTCCGGTCAAAGTATTCGGGGAAACTCGCAGACTCGAGCATGTCGATGCAGCACGAAAATCTGCA AGACATGCTGTTGCTGCCATAATTGATGCAGACAAATGTGGCGAATTTGATTATCTTCCTTTTTTCTACTCCAGAGTGTTCGCGTTGTCATGGCAATTTT ATGGGGATAATGTTGGTGAAGTTGTGTATTATGGAGACATGTCAAGTGGTGAAACATTTGGAGCATATTGGATTAGCAAGGGTCACCTTGTTGGGGCATT CCTTGAAGGTGGAACCAAAGAAGAGTATGAAGCAATAGCCAAGACCACTAGGTTAAGGCCTGAAATTGAAGACCTGGGCGAGCTGGAGCGGCACGGTTTG GGGTTTGCAGTGACAGTTAGCCAGAAACCGGCACCAGCATTGCCACTGGTCGATGTTAGAGCTTCTGACCTACTTCTGGAAAAACCACTGTTTGCCTGGC ATGCTACTGCTGGGGTTATTCTTGCTGCTTCCATAGCGGCATTCGCGTATGTTTATGGAAGAAGACGCCATAGATGGTGAGACCAAATCAAGATTATTGA TGTATATGCAAACTCTAGGCGGATCCAGAGGTTGTAACATTGTTAGGCCTAGGATATAGTATCATATACTTTGTTGTATCACGTCCAATTTGCAATTTAT ATGATGACAAGTACATAAAACTATGATTAATTAACTTCAGTGTGCACATTGATAATTAAAAGCAATAAAAAGAGAATTTATAGTATTTTGCATTGGGGGC ATGTTCACTAACATCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_157486; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_327730
| Blastp | Monodehydroascorbate reductase 4, peroxisomal from Arabidopsis with 70.18% of identity |
|---|---|
| Blastx | Monodehydroascorbate reductase 4, peroxisomal from Arabidopsis with 71.23% of identity |
| Eggnog | pyridine nucleotide-disulfide oxidoreductase(COG0446) |
| Kegg | Link to kegg annotations (AT3G27820) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453207.1) |
| Pfam | Pyridine nucleotide-disulphide oxidoreductase (PF07992.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |