Ll_transcript_326422

• Id Trinity: TRINITY_DN48016_c1_g1_i13
• Name Transcript: Ll_transcript_326422
• Sequence: GGTGGGGTGCATTACTCAGAACATGCAAAGTCACAAACTTCTATTATAAGAGGTACATAAACACCATAAAAGCACCCTTACAAAAAATAAATACTATTTC CATAAAGTAATACCATATTGAAATTTATAGCATCAGCTCAACTAACTATAGTAAAACATCAGCTTTTGTTAAATTCATCACACATCAGATAGACATAACA TTGAATCACAATGGAAGATGTATACACTGTGAAAGTAGAGGAAGCAAGACCAGCAACTCATGAGAAACCATCAGCAGGTCCTGTGTATAGATGCATTTAT GCTAAAAATGCTCTATTGGAACTCCCTTCTCATTTTCAATCTCCATGGGATTTCTTCAGGGACTCTGCTACGAGGTACCCCAGCAACCCAATGCTGGGTC GGCGCCAAAAAACTAAAATCGATTCAAAGGTGGGTCCTTATGAATGGGTCACATATCAGGAGGCTTATGATGCTGCTGTAAGAATGGGTGCAGCCATGAG AAGCTGTGGTGTCAATCCTGGTGACCGTTGTGGCATATATGGATCCAATTGCCCCCAATGGATAATTGCAATGGAGGCTTGTAATAGTTATGCAGTAACA TATGTCCCATTATATGACACTCTTGGTCCTAATGCAGTGGAGTTTATCATAAACCATGCTGAAGTTTCAATAGGATTTATACATGAAAACAAGATTCCTT CTGTTTTGAAATGTCTTGATCGATGTTCTTCAAATCTTAAAACTATTGTGAGTTTTGGTAATGTTTCAACCACACAAAAGAAGGAAGCTGAGGAATTTGG TGCATCCTGCTTTTCATGGGAAGAGTTTCTCCAGTTGGGGAATGTGGATTTGGATCTACCATTGAAAAAGAAGACTGACATCTGCACAATCATGTACACA AGTGGAACAACAGGTGAACCAAAAGGTGTTATTATCAAGAATGAGGCTTTCATGGCTGAAGTGTTGTGTATTGATCAAATACTTCTTTTAACAGACAAAG CGGCAGCAGAAGATGATGTCTACTTTTCTTTTCTTCCTCTTGCTCATGTATACGACCAGATAATGGAGACCTATTTTATCTACAAGGGCTCCTCGATTGG ATTCTGGCAAGGCGATGTTAGGTTCTTAATGGATGATATCCACGCACTAAAACCAACAATATTTTGTGGTGTTCCTAGAGTTTTTGACCGCATTTATGTT GGTATCAATAACAAAATATCATCTGGAGGAACACTGCGGAATGCATTGTTCCAGTATGCATATAACTACAAGTTGGGATATTTAGAGAAGGGTCTTCCAC AAGACAAAGCAGCACCATTGTTGGATAGGATTGTGTTTGATAAGATAAAACAAGCATTAGGTGGACGAGTCCGTCTCCTGTTATCAGGAGCTGCTCCTTT GCCTAGGCATGTGGAGGAGTTTTTGAGGGTCACTTTGGGATGTACTTTGTCACAAGGATATGGCCTTACCGAAAGTTGTGGTGGGTCTTTCACTGCAATA GCCAATGTGTTTTCGATGATGGGAACAGTTGGAGTCCCCATGACAACCATTGAGGCCAGGCTTGAATCTGTACCAGAGATGGGATATGATGCACTTTCCA GTGAAGCCCGTGGTGAAATTTGCCTGAGAGGGAATACCTTGTTCTCTGGCTACCACAAGCGTCAAGATCTTACTGAAGAGGTCCTAGTTGATGGTTGGTT TCACACAGGTGACATTGGAGAATGGCAGCGAAATGGAGCCATGAAAATTATTGATAGAAAAAAGAACATCTTTAAATTATCTCAAGGAGAATATGTTGCT GTGGAGAATATTGAAAACAAATATTTACAATGCCCTCTTATAGCATCGATTTGGGTCTATGGAAACAGTTTTGAGTCTTTCTTGGTGGCTGTGGTTGTTC CTGAAAGACAGGCCCTTGAAGATTGGGCAGTGAAGCATAATTTGACCGATGATTTTAAGTCTTTATGTGAAAATCTGTCGGCAAGAAAATACATTTTGGA TGAGCTCAACAGCACTGGTCAGAAACACCAACTTAGAGGTTTTGAGCTGCTAAAAGCAGTTCATCTGGAACCAATTCCCTTTGACATGGAGAGAGATCTT ATAACTCCAACATTCAAATTGAAGAGACCGCAATTGCTCAAGCACTATAAGGGTTGTCTTGATCAACTATACAAGGAAGCAAAGG
• Tissue: pods
• Gene name: LI_gene_157491;
• Additional information: details;

Expression of Ll_transcript_326422

FPKM

• PAB: 1.9
• PNAB: 41.5
• PS1: 33.7
• PS2: 16.1
• PS3: 41
• PW1: 16
• PW2: 14.2
• PW3: 3.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_326422

• Blastp: Long chain acyl-CoA synthetase 2 from Arabidopsis with 69.07% of identity
• Blastx: Long chain acyl-CoA synthetase 2 from Arabidopsis with 69.07% of identity
• Eggnog: Amp-dependent synthetase and ligase(COG1022)
• Kegg: Link to kegg annotations (AT1G49430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019412859.1)
• Pfam: AMP-binding enzyme (PF00501.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;