Ll_transcript_326429

• Id Trinity: TRINITY_DN48016_c1_g1_i18
• Name Transcript: Ll_transcript_326429
• Sequence: ACTCTCCATGGGACTTCTTCAGGTCACTTTTATTTTCTTTACGTACTATATTTATGGTCTACGACAACTCCTTTACTTTCCACAAATTTAAAACCGTGGC CTAAAACTACATTGGACTATGGTTTATAATATTATTATCTTATTTATTGTTTTATGTTTGGGTAGTACAACAAATATCAAAGAAAGACACAATGATTGCT TTTTATAAAAAAAATTATTCACTCTTGAACTATGGTTTATGAGTGGTTTCCTATTAATTTTCTATTTTCCCTATCAAATTGTGATGAAAGAGATTATCCT ACATGGCTTAAGTGTTCATTGTATACAATAAAGCTTAGAGATTGATTCTCTACCATGTTTCTTCTTGTCATATAGTCATGTGGAGCAAAGATATTATTAC AAAAGAAGTTTCACAAATCATAATTATGCCTATAAATAGAATCTTTGTTGTGGTAGTTGCAACTACAAGTTTTTCCTAGACCATGCAAGGAAAAATATTT TGTTGTGATGAGAGACACTTCAATCTGTACAATGAATCTATGAATAAAGATGATATGTTTCAAAAAATTTATGTCTGTATATCTTAAGCCAATCATATTT TATCAAGTGATATAAATAAAATTATTTTCTATTTTCTGATTTTTTTCGTTTTTAGTTGGAATTTTTGATCGAATTAGGATATAAGAATGAGATAGATGAT TTCCATTCTAAATCCACTGAGGATATAAAGTTAAAAATATTTAAATGTACATTCGAACATTAAGTCAACTATGACTATAATATTTTTCAATATAAAATTA CCTCATTTTACACTTTAAACTCAGTTCCAAGTACTTAGGATAAGAAAATATTATTTTAAAATGCAGCTCATTTTACACCTTGTCAATGATAATGAAGTTT GATAGGATGCTTATTTTTCACTTTATAATCTCACGTGATTTAAAAACAGAATTGATTAAACATATAAAATGTGTAGTGCCTCTAAAGAATTTTAGTATTT GGATATGAGTAGTTATTTGTTAGCATTTTTTATGTTTCCTTTGATAGGGACACTGTTAAGAGGAACCCCAGCAACCCAATGTTGGGCCAGCGTCAAAAAA CTGATTCAAAGGTTGTAGGCCCCTATGTATGGCTGACATATCAAGAGGTTTATGATGCTGCAATCCAAATGGGTTCTGCTATGAGAAGCCTTGGTCTCAG TCCTGGAGATTGTTGTGGCATATATGGCTCCAATTGTCCAGAATGGATCATTGCAATGGAGGCTTGCAATAGCTGTGCAATAACATATGTTCCATTATAT GACACCCTTGGTCCAAGCGCGGTGGAGTTTATCATAAATCATGCTGAAGTTTCAATAGCATTTGTGCAGGAAAAAAAGATCTCAGCAATATTGTCATGTC TTGATCGGTGTTCTTCAAATCTTAGAACTATTGTGAGCTTTGGATATGTTTCAACTACACAAAAGAAGGAAGCCGAGGCGCATGGTGCGTCCTGCTTCTC GTGGGAAGAGTTTCTCCAGTTGGGAAGTACGGATTGGGATCTACCATCAAAAAAGAAGAGTGACATTTGCACAATAATGTACACAAGTGGAACTACCGGA GAACCCAAAGGTGTCATAATCAAGAATGAGGCTTTCATGGCTGAAGTGTTGTCTATTGACCACATGCTTTTGCTGACTGACAGAGTGGCAGGAGAGGATG ATGTCTACTTCTCCTTTCTTCCTCTAGCTCATGTATATGACCAGATAATGGAGACCTATTGTATACACAAGGGCTCCTCAATAGGATTTTGGCAAGGCGA TGTCAGGTTCTTGATAGAAGATGTTCAAACACTTAAACCAACTATATTCTGTGGTGTTCCTAGAGTTTTTGACCGTATTTGTTCTGGTATTAATAGCAAA GTTTCTTCTGGAGGAGCACTGCAGAGTACATTATTTCACTATGCATATAACTACAAGTTAAGATATCTGGAGAAGGGTCTTCCACAACACAAAGCAGCAC CTCTGTTCGATAGGCTTGTGTTTGATAAGACAAAACAAGCGTTAGGTGGACGAGTTCGTATCCTGTTATCAGGTGCTGCTCCTTTGCCTAGGCATGTAGA GGAGTTTTTGAGGATCACTAGTGGATCAACATTATCACAAGGATATGGTCTTACTGAAAGTTGTGCCGGCTGTTTCACGGCGATCGGTGATGTGTTTTCT ATGATGGGAACAGTTGGAATCCCCATGACAACCATTGAGGCCAGGCTTGAATCTGTGCCAGAGATGGAATATGATGCACTTTCGAGTGAAGCCCGCGGAG AAATTTGCCTGAGAGGAATTACTTTGTTCTCTGGATACCACAAGCGCCAGGATCTTACTGAAGAGGTTATGGTTGATGGTTGGTTTCATACAGGTGACAT TGGAGAATGGCAACCTAATGGAGCAATGAAAATTATTGATAGGAAAAAGAATATCTTCAAATTGTCTCAAGGAGAATATATAGCTGTGGAGAGTATTGAA AACAAGTATTTGCAGTGCCCTCTTATAACATCGATTTGGGTGTATGGAAATAGTTTTGAGTCATTCTTGGTGGCTGTGGTGGTTCCTGAAAGAAAGGCCC TTGAGGATTGGGCACTAGAGCATAATTTGACTAATGATTTTGAGCATTTATGTGATAATCTGAAGGCAAGAAAATACATTATGGATGAGCTTAATAGCAT TGGTCTAAAGCACCAACTTAGAGGATTTGAACTGCTAAAAGCTGTTCATTTGGAACCAATTCCCTTTGACATTGAGAGAGATTTAATAACTCCAACATTC AAACTGAAGAGACCACAGATGCTCAAGTACTATAAGGACCATATTGATCAACTATACAAGGAAGCAAAGGTGTGAATCATGTGGGCATGCTATATGCAAT AGTATTAATTTATGTCTGTAAAATCAAAAAAGCTATTTGAATTCTTGTATACTTTGGCTCATTACTGTATTGACTAAAATGAAAAGCTAAAATGGTCAAC TATTGACAATATTATTTAATAAGATTATGGGAACATTATGGAAAGACAATATGTGTTTTGTTTAACGATCACTTATTCTAACATCATTAGTCATTTGTAC ACCAAATTTGGTGATAATATTGGTGCTGTTTGTATCAAAACTATATTAACTGAGTTCTAAGCTTGTATGGTTATGGACATGGAAAAAACAATGTTGCAAG CGAATAACCATAAAACCAGAATAGCAAAGCAGGATAGCAAATGCTACAAGTTATA
• Tissue: pods
• Gene name: LI_gene_157491;
• Additional information: details;

Expression of Ll_transcript_326429

FPKM

• PAB: 0.5
• PNAB: 0.2
• PS1: 0
• PS2: 0
• PS3: 0.1
• PW1: 0
• PW2: 0.6
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_326429

• Blastp: Long chain acyl-CoA synthetase 2 from Arabidopsis with 68.67% of identity
• Blastx: Long chain acyl-CoA synthetase 2 from Arabidopsis with 67.86% of identity
• Eggnog: Amp-dependent synthetase and ligase(COG1022)
• Kegg: Link to kegg annotations (AT1G49430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420557.1)
• Pfam: AMP-binding enzyme (PF00501.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;