| Id Trinity | TRINITY_DN48016_c1_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_326432 |
| Sequence | GGTGGGGTGCATTACTCAGAACATGCAAAGTCACAAACTTCTATTATAAGAGGTACATAAACACCATAAAAGCACCCTTACAAAAAATAAATACTATTTC CATAAAGTAATACCATATTGAAATTTATAGCATCAGCTCAACTAACTATAGTAAAACATCAGCTTTTGTTAAATTCATCACACATCAGATAGACATAACA TTGAATCACAATGGAAGATGTATACACTGTGAAAGTAGAGGAAGCAAGACCAGCAACTCATGAGAAACCATCAGCAGGTCCTGTGTATAGATGCATTTAT GCTAAAAATGCTCTATTGGAACTCCCTTCTCATTTTCAATCTCCATGGGATTTCTTCAGGGACTCTGCTACGAGGTACCCCAGCAACCCAATGCTGGGTC GGCGCCAAAAAACTAAAATCGATTCAAAGGTGGGTCCTTATGAATGGGTCACATATCAGGAGGCTTATGATGCTGCTGTAAGAATGGGTGCAGCCATGAG AAGCTGTGGTGTCAATCCTGGTGACCGTTGTGGCATATATGGATCCAATTGCCCCCAATGGATAATTGCAATGGAGGCTTGTAATAGTTATGCAGTAACA TATGTCCCATTATATGACACTCTTGGTCCTAATGCAGTGGAGTTTATCATAAACCATGCTGAAGTTTCAATAGGATTTATACATGAAAACAAGATTCCTT CTGTTTTGAAATGTCTTGATCGATGTTCTTCAAATCTTAAAACTATTGTGAGTTTTGGTAATGTTTCAACCACACAAAAGAAGGAAGCTGAGGAATTTGG TGCATCCTGCTTTTCATGGGAAGAGTTTCTCCAGTTGGGGAATGTGGATTTGGATCTACCATTGAAAAAGAAGACTGACATCTGCACAATCATGTACACA AGTGGAACAACAGGTGAACCAAAAGGTGTTATTATCAAGAATGAGGCTTTCATGGCTGAAGTGTTGTGTATTGATCAAATACTTCTTTTAACAGACAAAG CGGCAGCAGAAGATGATGTCTACTTTTCTTTTCTTCCTCTTGCTCATGTATACGACCAGATAATGGAGACCTATTTTATCTACAAGGGCTCCTCGATTGG ATTCTGGCAAGGCGATGTTAGGTTCTTAATGGATGATATCCACGCACTAAAACCAACAATATTTTGTGGTGTTCCTAGAGTTTTTGACCGCATTTATGTT GGTATCAATAACAAAATATCATCTGGAGGAACACTGCGGAATGCATTGTTCCAGTATGCATATAACTACAAGTTGGGATATTTAGAGAAGGGTCTTCCAC AAGACAAAGCAGCACCATTGTTGGATAGGATTGTGTTTGATAAGATAAAACAAGCATTAGGTGGACGAGTCCGTCTCCTGTTATCAGGAGCTGCTCCTTT GCCTAGGCATGTGGAGGAGTTTTTGAGGGTCACTTTGGGATGTACTTTGTCACAAGGATATGGCCTTACCGAAAGTTGTGGTGGGTCTTTCACTGCAATA GCCAATGTGTTTTCGATGATGGGAACAGTTGGAGTCCCCATGACAACCATTGAGGCCAGGCTTGAATCTGTACCAGAGATGGGATATGATGCACTTTCCA GTGAAGCCCGTGGTGAAATTTGCCTGAGAGGGAATACCTTGTTCTCTGGCTACCACAAGCGTCAAGATCTTACTGAAGAGGTCCTAGTTGATGGTTGGTT TCACACAGGTGACATTGGAGAATGGCAGCGAAATGGAGCCATGAAAATTATTGATAGAAAAAAGAACATCTTTAAATTATCTCAAGGAGAATATGTTGCT GTGGAGAATATTGAAAACAAATATTTACAATGCCCTCTTATAGCATCGATTTGGGTCTATGGAAACAGTTTTGAGTCTTTCTTGGTGGCTGTGGTTGTTC CTGAAAGACAGGCCCTTGAAGATTGGGCAGTGAAGCATAATTTGACCGATGATTTTAAGTCTTTATGTGAAAATCTGTCGGCAAGAAAATACATTTTGGA TGAGCTCAACAGCACTGGTCAGAAACACCAACTTAGAGGTTTTGAGCTGCTAAAAGCAGTTCATCTGGAACCAATTCCCTTTGACATGGAGAGAGATCTT ATAACTCCAACATTCAAATTGAAGAGACCGCAATTGCTCAAGCACTATAAGGTTTGTCTAACGTACTATTTTTAATATTATATGTTTGACTATTTACATT CTATTACACCTTATGGTAAAGATTTGTTTTTGTTCCTTAACTTGTTGAGTTTTAGCAGTATGATTCACAATTTGTACCATATTCGTCATGATTATTAGGA AGGAATGTCTGCTAAATGTTTGTGTTTGCCAACATTATTTGCAGGGTTGTCTTGATCAACTATACAAGGAAGCAAAGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_157491; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_326432
| Blastp | Long chain acyl-CoA synthetase 2 from Arabidopsis with 69% of identity |
|---|---|
| Blastx | Long chain acyl-CoA synthetase 2 from Arabidopsis with 69% of identity |
| Eggnog | Amp-dependent synthetase and ligase(COG1022) |
| Kegg | Link to kegg annotations (AT1G49430) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019412859.1) |
| Pfam | AMP-binding enzyme (PF00501.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |