Id Trinity | TRINITY_DN48017_c0_g1_i3 |
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Name Transcript | Ll_transcript_326729 |
Sequence | GCAAACTTTGACGAGTTGATTGCTGCTGCTGCTGCTGCTGCTGCTAATAGGGATCCTTTAGAGGTTGCCAAACAGATTGAGCTTCACTTTCAGAGGGCCT CTGACTCTGGCTCCCAAGTTGCCAAGATCCTCGAAGTTGGAAAGCTTCCATATCATCCAAAACACACAGGACCTTATCAAGGTTACCTACCTATTCTCAA TTACTTTCATTTCTTTATTATTGCTACTCACTTCTTATTCCAAAATATTATATACACTGCCCTCTATCATGCAGCATCTTCCAAAATATTACATGCGGTT GCTCCCTCGTTATCCCTCGTCTCTTCACAACCTTCTACTTCTAAAAGTGCTGAGTCTACCGAGCTTGCTGCTACCGCTACCTTAGATTTTGACTTTGATC TAACTATGAGGTCACGCAATCTTTCTTCTACACTGCAGAAGCTTTACCTTTGGGAGAAGAAACTCTACAATGAGGTCAAGGCAGAGGAAAAGATGAGGGT TTTACATGATAGGAAATGTCGCAAGCTGAAGCGTATGGACGAAAGGGGCGCCGATTTTCACAAAGTTGAATCAACTCGAGCTCTCATTAGGAGTCTGTCC ACAAAAATAAGAATGGCAATTCAGGTCGTTGATAGGATTTCTATGACAATAAATAAGATAAGGGATGAAGAACTGTGGCCCCAGCTGAAGGAATTAATTC AGGGGTATGTGAAGTTAAGAACTTCTGGTCTTGTTATTTATGCAGGTTCTTAATATCTCTCTCTTCCTGACAGGCAATTTGTTCCGTTCTGTAAGAATCA TCTTCATGCCTAGTTGAGAACAGAGGCCATTAATTTATTTACCCTTGTAACTAACTACATAGACATATTTTCTCACTGGTTCTCTTATTCATTCTTCTTT TTATATTTCTTCAATCAATGCTCATTTTATTATGTTGATATTATGCATGTGATATCCATACATATGCATAACGATCAGTGATTTTATCTTTTATTATTTG GTGGTAACATATTCAGAACATATATGGTTATACAATATAATACACTTATTTTCAGGTTGACCATAATGTGGAAATCCATGCTTGAGTGCCATCATTGTCA GCGTGAAGCAATTAAAGAAGCTAGGATTCTGGGGTCTGTTGGGTCCAGGAAGAAGGGTGGTGATAGTCATCTTATGGCTACGAAGCAGCTGGAACAAGAG CTTATCAATTGGACTTTCCAATTCTCTAGCTGGATAAGTGCCCAGAAAGGTTATGTTAGAGCATTGAATAATTGGCTACTGAAATGTCTCATGTATGAAC CTGAAGAAACACCTGATGGCATAGTCCCCTTTTCTCCCGGTAGAATAGGTGCACCCCCGATATTTGTAATATGTAATCAGTGGTCCCAAGCTTTGGATAG AATATCTGAAAAGGAAGTTGTTGATTCCATGCATGTATTTACCATGAGTGTCCTTCAGATATGGGAACAAGATAAGCTAGAAATGCACCGGCAGATGGTG GACAACAAGGATCTTGAGAGAAAGGTGAGAAATTTAGATAGAGATGACCAGAAGCTACAGAAGCAAATCCAGGCTTTAGAGCGGAAAGTGATTATGGCAT CTGGGGAAGGTAAGGGTCTGTCGGTTTCTGAAAATATCATATATAAGAGCGACAAAAACAGTAGTCTACAGGCTAGCTTGCAGCGCATTTTCGAGGCCAT GGAAAGATTTACTGATGAATCTGTGAGAGCGTATGATGAGTTGTTACAGCGGAGTGAAGAAGTAAGCGCCACCAGAGATCATGAATGAGTTCCGATAGGG TGATTTACTTTGATGCAAGTTAGAACTATATCTTCACCATTTGTCAAGAACACATTCTTGTTGATATCCTGCTACTAGAAGATGATCTACAGGGTTCGTG TGCCTTCCGAAAAGAGTTGTGCAAAGATGTTGTTCCTCTATGCATTGGTGTTGGGATGGAACATGTCTGTACAGATGCGGGGGTTGAGGTGTAGGCGCAT GCCTATGTTGCGACTTATCTTGAGAATCTGTTTGGTTATGTCTGCATAGATACATGTCTGTACAAGTTTTACTCGGACAATGTGTGCCTACCAATACAAA ACTACAAGGGAAGTTGTGCGGACTAAACCAATGTCACTGGCTGGGTTAAGGACAGATATTCCTTTCTACATTAGAAAATGTAGGTACATGTTTGAAGGAA GGAAGGGAGCTGGAGGTACTTAACTTAACCCTGAGCAAGTTTTTGTGGTGATGAAAGGGTGCTCATTGCTGAAACTGAAATAGGAAAATGAGCATACAGA CGGGAGAAAGAATCATATAGATAATTGGCAGGCTTATGGTATATTGGGTTGGAGTGATGCCTTCATGTATAAAGTTATGTCCCTGTCATAAAATATTCCC TTTTTAAGTTTTATTATTGTACAGAGATTACCATGTATGACATTGGGCAATCTTAATGAAATGCAATTAGAATAAAGTATGTTTTTATAGGCCATTTGGG ATTCCCCCCCTCGTAGGTGAATAGAGAGACATTGGATCTTTAAATGGATTGAGAAGGATGCCAAATTCTAACACACAAATAAGTGGAACACATTGAGATA TAAACTTGTTCTCCTATACCTAGTGTCTCCCACTCCCTGCTTATGTTTGCCTTCTTTTAATCGTGTATTGGTTCACTTGTTATTTATATTACTTAATTTC TTCTTGAAGAATCCAAGâBLAST |
Tissue | pods |
Gene name | LI_gene_157499; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_326729
Blastp | Nitrate regulatory gene2 protein from Arabidopsis with 38.68% of identity |
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Blastx | Nitrate regulatory gene2 protein from Arabidopsis with 38.68% of identity |
Eggnog | Protein of unknown function (DUF632)(ENOG410YACB) |
Kegg | Link to kegg annotations (AT3G60320) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435788.1) |
Pfam | Protein of unknown function (DUF632) (PF04782.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |