| Id Trinity | TRINITY_DN48019_c0_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_327589 |
| Sequence | AACAACAGAAAAAAAAACGAACTGAACCATCACCCTCACAAATTAACATAACAGACACAGAAATAACCAATTCAGAATCTCATACTCACTTTTCATTCAT TCATCTATAACCGCTTCTTCATAATCCTCTCCCTTAAACCGTTGTTAACTAAATCATTTCCATTAGATGAATGAAAATTTCTGATTCTATTGCGTGTGAT AGAGTTCTTGTCCTTCTTCGCTAACATGGCTATGCTTCGCAAATTGTTCTTTCGCACGCCTCCTGATAATCTTATTGAAATTTGCGACAGAGTTTATCTT TTTGATTGCTGCTTCATCACGGAAGCATGGACTGAAGACAAATATAAAGTGTACATGGATGGAATAGTAGGCCAGCTTAGAGAGAATTTGACTGATGCTT CCATTTTGGTATTCAATTTCCGGGAGGAGAACAGTAAGAGTCAATTAGCAAGCATCATGTCTGATTATGACATTACCATCATGGACTATCCTCGCCACTA CGAGGGTTGCCCGATTCTCAAAATTGAGCTAATTCACCACTTCTTAAGGTCTGGTGAAAGCTGGCTCTCACTTGGCGAGCACAATGTGTTGTTGATGCAT TGTGAGCGTGGTGGTTGGCCCGTTTTGGCTTTCATGCTTGCTGCATTGTTGATTTATAGAAAGGTTTATACCGGGGAGCGTAGAACTTTGGATATGGTTT ACAGGCAGGCACCACACGAGCTTTTGCATCTGTTGACGCCGATGAATCCTGTCCCTTCCCAATTGAGGTATCTGCAGTATGTTTCCAGGAGGAATGTGAC CTTGGATTGGCCTCCATTGGATAGGGCACTTGTGTTGGACTGCATCATTCTTAGATTTATTCCAAACTTTGATGCCCAAGGTGGTTGTCATCCAGTGCTT AGAATTTATGGCCAAGATTGTTTTAGTGCAGATAAGAAAACAAAAATGTTGTACTCAACGCCAAAGAGAACCAGAAATGTCAGAGCTTACAAGCAGGGAG AGTGCAAACTAATTAAAATTGATATCAATTGCCATATTCAAGGTGATGTCGTGATTGAGAGCATTAACTTGAGTGGTGACATGGAGCGTGAAATAATGAT GTTCCGTATCATGTTCAACACAGCTTTTGTTAGATCTAATATACTAATGCTTAACCGTGATGAAGTCGACATTTTATGGGACTCTGAAGATCACTTTCCA AAGGATTTCAGAGCAGAGATCCTTTTCTCAGAGTTGGATGCTGCTGCAGCAGTTACCGCAGATGGCACCTCATGCTTTGAGGAGAAAGAGGGACTGCCAG TGGAAGCCTTTGCCAAGGTTCAAGAGTTTTTTAGCCATGTGGACTGGTTGAGTCCCAAGGCAGATGCTGCACTTAATGTACTCCAGCAGCTAAGTGTTGC AGTTATCATGAACGACAAGTTGGATAAAGTTTCTGACCAGTCTTCGTCTAAGCAATCTCCGGATAAAGATATAATGAGTGGAAAAAAGGATAAGGCCAAC AAGGTTGATGCTACTCCACAACAGCCTAGTACTTCTGATATGGTCTGTCAAGAAACGCCTAGTGCTTCTGGAAGAACCTCTGCTTCTAGTATATCTCTGA CAGGTTCTAAAAATATTGACATAAAACCGCAGGCATGTGATACTGCTTCATCTGGTTTTGTGGATACTGCTCTTTCCCCAGAAACACCTCCACTGAAGCC TCCCTCAACTACTTGTGCTAAAGATTCTGATGATTCTCCTCCGCATATGGAATCACTTCCTCATCATCTTTCGTCGTCGAAAACAAGACAACATCATGTT GCCGAGGAAGCTAAAGCCCAACCACAAGACAAAAGTGAGTCGTCTATTTCCAGCTCAATATCTGGGACACAGTCCTCATCTACTTGTCATAGTAAGTTAC CAGCTGATGCTATTTCTCATTCATCAGCTTCAGCAATTACTTCAATTCAAGGAACCCGTTCACTTTCTCCCAAAACACCACCGAAAAAGATTCCGCCTGT TAGAACAAGACCTGAGCCATCTCCTTCACAACCTCCAACTCCACCTCCTCCTCCCACTCCACCTCCGCCTCCCACTCCACCTCCTCCTCCCACTCCACTA AAGGATCATAAACCAGTTAGAGCTAGACCTCCTCCACCTCCACCGCCTCCTCTTCTTTCGGGAAAAGCTTCAGGTGTTGCTCTAGCACAACCACCACCTT CCTGCAATCGCCTTAATCCTTCATTTCAACAGTTCTCACCTGCTCCTGCAGCACCGGCTGTTCCACCACCTCCTGTAACCTTTGGTAAAGGAGGTCTAAA ATCAGGCAGTGCTTTTCCGGGCTCTATTTCTGTGGGTGGTAATGGAAATAATGTGTCTGCTACAACAGGACCTCAATCTAATTTGTCTACAGGCTCTAAA GGACGGATTCTATCACGTACGATAAGTTCAAAGAATAACACCAAAAAGTTGAAGCCATTGCATTGGCAAAAACTACCAAGAGCAGTGCAAGGAAGTTTAT GGGATGAGACACAAAAATCTGGCGAAGCTTCCAAAGCCCCAGAGATTGACATGTCGGAACTTGAGAATCTCTTCTCAGCATCAGTCCCAAGCTCAGACCG TGCAAGGAAGTCAAATGCCCAAAGCTCAGTTGGGCATAAATATGAAAAAGTGCAACTGGTAATTTAGCTTTAGATTCTAGTAGCATAGATGGTACATGAT GTTTTCTTCATAATCTTGTTGTTCATATCTGAATGTGATGGGAGAAGGTAAGAAAAGTAATTAGTAGGAACTGCATTTATTAACTGGTTATCATTTTAGC TGTCACAATATAACATGAAGTTGAAAGTTGTTATATGTCAGCTTGTTAACGATGGAAACTTGTAGAGAACTAGAGATGACAAAGTCAAGTATCAAAGTTG GTGCACACAAAATTGGAATATCTTAGGATGATCCTGATTGAGCACAGGCGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGCCATTACATG ATTTAATGAGCTCAGTGCTAGCACTGGAAGAGTCAGCACTAGACAGTGATCAAGTTGAGAACCTCATAAAGTTTTGTCCGACAAAAGAGGAGATGAAAGT ACTCAAGGGTTATACAGGGGAAAAGGAGAAGTTAGGGAGATGCGAACAGTTCTTCCTCGAGTTGATGCAAATACCGCGGGTAGAAACCAAGCTCAGAGTT TTTTCATTCAAGATTCAGTTCAATTCTCAGGTTTCTGACCTTAGAAATAGCCTGAAAGTAGTGAACGCTGCTTCAGAAGAGATCAGGAATTCTGTCAAAT TAAAGAGAATTATGCAAACAATACTTTCTCTGGGAAATGCTTTGAACCAAGGAACTGTTAGGGGTTCTGCTATTGGATTCAGATTGGATAGCCTTCTTAA ACTCACAGAGACACGTGCACGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGCTGGCTGACCAACTACCAGAAGTTTTAGATTTCTCCAAG GATCTTTCTAACCTAGAGCCAGCAGCAAAGATCCAAATAAAGTTTCTGGCAGAGGAGATGCAAGCTGTAAGCAAAGGATTAGAGAAAGTTGTACAGGAAC TATCAACCTCTGAAAATGATGGTCCTATATCAGAAACTTTCCGCAAGAATTTGAAAGGTTTCCTCTCTTCTGCTGAAGCTGAAGTGCGTTCATTGGCTTC ATTATATTCTGGCGTGGGTAGGAATGTAGATATGTTGATTCTTTACTTCGGTGAAGATCCCTATCGCTGCACTTTTGAGCAAGTTGTCACAACTTTGCTC AACTTCACTAGAATGTTCAACAAAGCCCATGAAGAAAACTGCAAGCAGCTAGAGCTTGAAATGAAGAAAACAGAAGAAAGTGGGAAAAAGAAATGTGAAT CTGAAAGGAGATTACCTACGACGGTCAGCACCGGCAATGTCGAATGAGTGGTAATTAGATGAACTACTACCTTTGAGAATCAGCATATATACTCTAGAGT CCAGAATATGAATTTTTCAATGGACAAAAACAGTACTTATTGTAGCAGAATTAGTAGCAGCTGGCATTGAGAACCAGAATGGTAGAAATTTCATTACACT AAAAAAGTTGAGGTGTCTCTTTGAACCCTCACTTAGGTTTTAGAAGTGTGAATCTTATAGAATAGAGTAGATAATAGGCTAGCATTAGTTGTGTGAATTT GACAACCAACTTGTATATATGTTAACTTTCCTCAGGTAGCAAGCAGCAACACTGATTTCATGTCTGCAATGCAAAGCTTGATAAATTCTTTATAAGCCTA TGTGATTGATTTTTTCCCTTCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_157508; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_327589
| Blastp | Formin-like protein 13 from Arabidopsis with 59.87% of identity |
|---|---|
| Blastx | Formin-like protein 13 from Arabidopsis with 64.38% of identity |
| Eggnog | actin cytoskeleton organization(ENOG410XT5Z) |
| Kegg | Link to kegg annotations (AT5G58160) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441423.1) |
| Pfam | C2 domain of PTEN tumour-suppressor protein (PF10409.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |