Id Trinity | TRINITY_DN48019_c0_g3_i5 |
---|---|
Name Transcript | Ll_transcript_327592 |
Sequence | AACAACAGAAAAAAAAACGAACTGAACCATCACCCTCACAAATTAACATAACAGACACAGAAATAACCAATTCAGAATCTCATACTCACTTTTCATTCAT TCATCTATAACCGCTTCTTCATAATCCTCTCCCTTAAACCGTTGTTAACTAAATCATTTCCATTAGATGAATGAAAATTTCTGATTCTATTGCGTGTGAT AGAGTTCTTGTCCTTCTTCGCTAACATGGCTATGCTTCGCAAATTGTTCTTTCGCACGCCTCCTGATAATCTTATTGAAATTTGCGACAGAGTTTATCTT TTTGATTGCTGCTTCATCACGGAAGCATGGACTGAAGACAAATATAAAGTGTACATGGATGGAATAGTAGGCCAGCTTAGAGAGAATTTGACTGATGCTT CCATTTTGGTATTCAATTTCCGGGAGGAGAACAGTAAGAGTCAATTAGCAAGCATCATGTCTGATTATGACATTACCATCATGGACTATCCTCGCCACTA CGAGGGTTGCCCGATTCTCAAAATTGAGCTAATTCACCACTTCTTAAGGTCTGGTGAAAGCTGGCTCTCACTTGGCGAGCACAATGTGTTGTTGATGCAT TGTGAGCGTGGTGGTTGGCCCGTTTTGGCTTTCATGCTTGCTGCATTGTTGATTTATAGAAAGGTTTATACCGGGGAGCGTAGAACTTTGGATATGGTTT ACAGGCAGGCACCACACGAGCTTTTGCATCTGTTGACGCCGATGAATCCTGTCCCTTCCCAATTGAGGTATCTGCAGTATGTTTCCAGGAGGAATGTGAC CTTGGATTGGCCTCCATTGGATAGGGCACTTGTGTTGGACTGCATCATTCTTAGATTTATTCCAAACTTTGATGCCCAAGGTGGTTGTCATCCAGTGCTT AGAATTTATGGCCAAGATTGTTTTAGTGCAGATAAGAAAACAAAAATGTTGTACTCAACGCCAAAGAGAACCAGAAATGTCAGAGCTTACAAGCAGGGAG AGTGCAAACTAATTAAAATTGATATCAATTGCCATATTCAAGGTGATGTCGTGATTGAGAGCATTAACTTGAGTGGTGACATGGAGCGTGAAATAATGAT GTTCCGTATCATGTTCAACACAGCTTTTGTTAGATCTAATATACTAATGCTTAACCGTGATGAAGTCGACATTTTATGGGACTCTGAAGATCACTTTCCA AAGGATTTCAGAGCAGAGATCCTTTTCTCAGAGTTGGATGCTGCTGCAGCAGTTACCGCAGATGGCACCTCATGCTTTGAGGAGAAAGAGGGACTGCCAG TGGAAGCCTTTGCCAAGGTTCAAGAGTTTTTTAGCCATGTGGACTGGTTGAGTCCCAAGGCAGATGCTGCACTTAATGTACTCCAGCAGCTAAGTGTTGC AGTTATCATGAACGACAAGTTGGATAAAGTTTCTGACCAGTCTTCGTCTAAGCAATCTCCGGATAAAGATATAATGAGTGGAAAAAAGGATAAGGCCAAC AAGGTTGATGCTACTCCACAACAGCCTAGTACTTCTGATATGGTCTGTCAAGAAACGCCTAGTGCTTCTGGAAGAACCTCTGCTTCTAGTATATCTCTGA CAGGTTCTAAAAATATTGACATAAAACCGCAGGCATGTGATACTGCTTCATCTGGTTTTGTGGATACTGCTCTTTCCCCAGAAACACCTCCACTGAAGCC TCCCTCAACTACTTGTGCTAAAGATTCTGATGATTCTCCTCCGCATATGGAATCACTTCCTCATCATCTTTCGTCGTCGAAAACAAGACAACATCATGTT GCCGAGGAAGCTAAAGCCCAACCACAAGACAAAAGTGAGTCGTCTATTTCCAGCTCAATATCTGGGACACAGTCCTCATCTACTTGTCATAGTAAGTTAC CAGCTGATGCTATTTCTCATTCATCAGCTTCAGCAATTACTTCAATTCAAGGAACCCGTTCACTTTCTCCCAAAACACCACCGAAAAAGATTCCGCCTGT TAGAACAAGACCTGAGCCATCTCCTTCACAACCTCCAACTCCACCTCCTCCTCCCACTCCACCTCCGCCTCCCACTCCACCTCCTCCTCCCACTCCACTA AAGGATCATAAACCAGTTAGAGCTAGACCTCCTCCACCTCCACCGCCTCCTCTTCTTTCGGGAAAAGCTTCAGGTGTTGCTCTAGCACAACCACCACCTT CCTGCAATCGCCTTAATCCTTCATTTCAACAGTTCTCACCTGCTCCTGCAGCACCGGCTGTTCCACCACCTCCTGTAACCTTTGGTAAAGGAGGTCTAAA ATCAGGCAGTGCTTTTCCGGGCTCTATTTCTGTGGGTGGTAATGGAAATAATGTGTCTGCTACAACAGGACCTCAATCTAATTTGTCTACAGGCTCTAAA GGACGGATTCTATCACGTACGATAAGTTCAAAGAATAACACCAAAAAGTTGAAGCCATTGCATTGGCAAAAACTACCAAGAGCAGTGCAAGGAAGTTTAT GGGATGAGACACAAAAATCTGGCGAAGCTTCCAAAGCCCCAGAGATTGACATGTCGGAACTTGAGAATCTCTTCTCAGCATCAGTCCCAAGCTCAGACCG TGCAAGGAAGTCAAATGCCCAAAGCTCAGTTGGGCATAAATATGAAAAAGTGCAACTGATTGAGCACAGGCGAGCATATAATTGTGAAATCATGCTTTCA AAAGTGAAAGTGCCATTACATGATTTAATGAGCTCAGTGCTAGCACTGGAAGAGTCAGCACTAGACAGTGATCAAGTTGAGAACCTCATAAAGTTTTGTC CGACAAAAGAGGAGATGAAAGTACTCAAGGGTTATACAGGGGAAAAGGAGAAGTTAGGGAGATGCGAACAGTTCTTCCTCGAGTTGATGCAAATACCGCG GGTAGAAACCAAGCTCAGAGTTTTTTCATTCAAGATTCAGTTCAATTCTCAGGTTTCTGACCTTAGAAATAGCCTGAAAGTAGTGAACGCTGCTTCAGAA GAGATCAGGAATTCTGTCAAATTAAAGAGAATTATGCAAACAATACTTTCTCTGGGAAATGCTTTGAACCAAGGAACTGTTAGGGGTTCTGCTATTGGAT TCAGATTGGATAGCCTTCTTAAACTCACAGAGACACGTGCACGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGCTGGCTGACCAACTACC AGAAGTTTTAGATTTCTCCAAGGATCTTTCTAACCTAGAGCCAGCAGCAAAGATCCAAATAAAGTTTCTGGCAGAGGAGATGCAAGCTGTAAGCAAAGGA TTAGAGAAAGTTGTACAGGAACTATCAACCTCTGAAAATGATGGTCCTATATCAGAAACTTTCCGCAAGAATTTGAAAGGTTTCCTCTCTTCTGCTGAAG CTGAAGTGCGTTCATTGGCTTCATTATATTCTGGCGTGGGTAGGAATGTAGATATGTTGATTCTTTACTTCGGTGAAGATCCCTATCGCTGCACTTTTGA GCAAGTTGTCACAACTTTGCTCAACTTCACTAGAATGTTCAACAAAGCCCATGAAGAAAACTGCAAGCAGCTAGAGCTTGAAATGAAGAAAACAGAAGAA AGTGGGAAAAAGAAATGTGAATCTGAAAGGAGATTACCTACGACGGTCAGCACCGGCAATGTCGAATGAGTGGTAATTAGATGAACTACTACCTTTGAGA ATCAGCATATATACTCTAGAGTCCAGAATATGAATTTTTCAATGGACAAAAACAGTACTTATTGTAGCAGAATTAGTAGCAGCTGGCATTGAGAACCAGA ATGGTAGAAATTTCATTACACTAAAAAAGTTGAGGTGTCTCTTTGAACCCTCACTTAGGTTTTAGAAGTGTGAATCTTATAGAATAGAGTAGATAATAGG CTAGCATTAGTTGTGTGAATTTGACAACCAACTTGTATATATGTTAACTTTCCTCAGGTAGCAAGCAGCAACACTGATTTCATGTCTGCAATGCAAAGCT TGATAAATTCTTTATAAGCCTATGTGATTGATTTTTTCCCTTCC BLAST |
Tissue | pods |
Gene name | LI_gene_157508; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_327592
Blastp | Formin-like protein 13 from Arabidopsis with 59.87% of identity |
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Blastx | Formin-like protein 13 from Arabidopsis with 74.34% of identity |
Eggnog | actin cytoskeleton organization(ENOG410XT5Z) |
Kegg | Link to kegg annotations (AT5G58160) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441423.1) |
Pfam | C2 domain of PTEN tumour-suppressor protein (PF10409.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |