Id Trinity | TRINITY_DN48028_c1_g2_i9 |
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Name Transcript | Ll_transcript_327289 |
Sequence | TAGAATATTTGCTCTCTCTCTCTCTCACTCTCATACACTCCTAGTGTACTTTAAGTATGTTGTTTTTGGGTGAATGAAAGGTTGTTGTTGATTAATGTTA ATTATTACTAACATGCATCAAGATAGATGTCATGTCCCACATACTCAAATCCCCTTTAACACACTCATCAGCACTTACCAATTCATATATATATAGATAG AACCTCACTTACCCCAGTACAAACATTCCTTGTGACTTTCTTGCTGTCTACAAGTATAGTTCTTCCTCTTACTGTCTAGAATCTCTTTCTCCTCCATTGA ATAAAACCAATGTTCATACTCTAAGCCTCACTTCACTGAATTACCAAACCAGACCTTAAAGTACCATATCACTAAATTAAAACCAAGATATACAAATATT CCACATAGTTATTATCTCTTTCTTTCTTAAGATCAAACAATCCTTTATTCATCAGAAACTGAATGAGTTTGGTTTTAATTTTGGCATGACTTCCACATCT ACAGAAACTTTGCTAGCTTCAAGTTCTTGAAATAGTCTTCTATAGTTTTACCCCTCCTCCACCCCTTCCTCTCCTTTTTCTTTGCTTTGTTACACTAATC ATCATTCTCTATTTCCAAAAGATTTTCTTGAAATAGTTTCATGGATTACTTGAAGGAACTAGAAGGAAAAAGTGTCCATGATTGTTATCATCACCAGATA AAGGTCATGGACAAAATGGTTAGTACTCCTAGAATATGGGTACATGGACCCGTAATAGTTGGTGCTGGTCCCTCTGGGCTAGCTGCAGCAGCATGCCTTA AACAAAAAGATATTCCAAGCCTAATCCTTGAAAAAGCTGAATGCTTAGCTTCAATGTGGCAGCATAAGACTTATGACCGCCTTTGCCTTCATCTTCCAAA GCAATTTTGCCAACTCCCTCTTATGCCATTTCCTAAAAACTTTCCATCATATCCAACAAAGCAACAATTTTTGACATACTTGAAAAATTATGCTGAACAT TTTGATTTAAAACCAGCTTTTAGTACTACTGTGGTTAGTGCTGAATTTGATCATAGGAGTGGATTTTGGAGGGTGAAGACTGAGGGAATGAAAAAGAATG AGGATGTGGAATATGTTTGTAAATGGCTGATAGTAGCTACCGGAGAAAATGCTGAGGAAGTAGTGCCTCAAATTGAAGGAATGGGAGAATTTCAAGGGAC TATCTTACATACTAGCTCATATAAGAGTGGCAGCATGTTTTGTGGGAAGAATGTTTTGGTGGTGGGGTGTGGGAATTCAGGCATGGAGGTTTGTTTGGAT CTTTGCAACCATAATGCTCACCCATCCCTTGTGGTTAGAAATACGGTGCATATCTTGCCACAACAGATGTTAGGAAAATCAACTTTTGGTTTATCTATGT GCTTGCTCAAGTGTTTCCCTATACGTTTTGTTGATCAATTTTTACTTGTAATGTCACATATTATGCTTGGGGACACATCTCAATTTGGACTTAATCGTCC TAAACTTGGTCCTCTAGAGCTCAAGAACTTGAATGGCAAGACACCAGTTTTGGATGTTGGAACTCTTGCTCAAATCAGAAGTGGAAAAATTAAGGTAAGA AACTTATTAATGTGGCTACACTATATATATTTTTGTCACATATTTCTGATGTACAATGATGTGAGTCTCTATATTGTGCGCCATGTATTTAAACCAAGAG TTTTCATCATATTTTGTTCCTTGTCTTAATCAAAACAATTAAAAGGAAAATGAATACATTTTTCGGTTTCATTATTTCCAACACCAAATGTTGTCTAATA TGTATAGGTTTGCCGGGGAATTAAACGAGTAGCACAGCACACAGTGGAATTTGTTGATGGAAAAGTAGAAAACTTTGATGCCATCATTCTAGCAACTGGT TACAAAAGCAATGTACCCTCTTGGTTAAAGGTGCTCCCTTTAATTCTTATGTTCATAACTTTAGCATAGTTTTGGTAAGGACATTGTTACACCCATTTAT AACAACATATTATTTTACATTTATGTAGTTTTTATCTTCTTCTTA BLAST |
Tissue | pods |
Gene name | LI_gene_157579; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_327289
Blastp | Indole-3-pyruvate monooxygenase YUCCA2 from Arabidopsis with 64.44% of identity |
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Blastx | Indole-3-pyruvate monooxygenase YUCCA2 from Arabidopsis with 64.44% of identity |
Eggnog | Monooxygenase(COG2072) |
Kegg | Link to kegg annotations (AT4G13260) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436640.1) |
Pfam | Pyridine nucleotide-disulphide oxidoreductase (PF13738.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |