Ll_transcript_328399

Id TrinityTRINITY_DN48031_c2_g1_i13
Name TranscriptLl_transcript_328399
SequenceATAAGAATAAGTATTTCTTTCATCTTTCATTTTTCCATTTTTTCCATTTTTTCCATTTTTCAATTTTCAATGCTATCGGTGTATAAAATAAGCTGCTCTC ATAACCACACACTCGCACATAACACCTTCATCCTTTTTCTCTCTCAATTCGCCTTTACTCTCTTTATCACATTCTTCCTCTTCAGGTTTCTGCTACTTTC TTTTCTCTTCACTTTTATTCTCTATTTTGCTCCAAACTTTTTTCCTCTTCATTCATGTTCTTACTCTTATGTCTATTGCCTGTGATTTTATCTTTTCCTT CATTAATTTTCTATTAATTTGTTTGTTTGTGATGTTAATTGTAGACCCTTTAATATAAATACCTCATTTTTATTTTCCATAATAGATTACTTGCTGACTT GTCACTTTTCATTCTTAAATTTTCACAAGGGCTCAGCATAGATAAGTTTTTTTATATAATTAATTTTCTGGGTTTGCTTTAAATAATTAGTCTTTGGATA AAACAAACATTGTTTGATTCATCTGCAAAAGGTTTGGTTGTTGTTGGATTTTATAGGTTGGTTTGCATGGCAACCACTTAGTATCATGAACTATTTTACC CAAAGTTCTGTCTGCGAGTTGGGTTTTGGAGGGAAATGAATAAAAAAAGTAAGGCTTGTGAGCCATAAAATACATTTGTGAAATGACTCTAAAGTCTCTC ATTTCATTTTATTCCCCTTCAAACCTCAACTCGCAAATATGCCCTAAAAGATTAAGGTGTTAGGTGAAGACGTTCATTAAGCTGTTAAGTGGAGACTTAA CAGATTTATGTTGTATAGATCCGAAAAAAAGTTTAATGTTGGTTGTCGATTGCCTAACACAGTCTTCATTTTTCATCCTAGCTTAGGAAACCGCTGACCA CGAAGTAATAACAAATTGTGTTATAACTACAATGATGGCAGCATCATCAGCATGTCTTGTTGGGAATGCTTTATCTACTCCTAATAACAGAAAAACTTTC GGCAAGGACTTAAATCGCAGATATCTCTTCTCATCATTGAGACGTTCTTCATCGAATAAGGGATCGAACTCAAAAGCAGTATTCATAAAGGCTTCCTTGG ACCAAAGTCAGGATGAAGGGAGAAGGGGGTTTATGAAATTGTTGCTTGGAAGTGCAGGAGTTAGCTTACCTGCATTGTTGGGAAGTGGAAGCAAAGCTTA TGCAGCTGATGAACAAGGTGTTTCCTCTTCCAGAATGTCTTACTCCAGATTTCTCGAATATTTGGACAAGGATAGAGTTAACAAAGTGGATCTGTATGAG AATGGAACCATAGCTATTGTCGAAGCTGTTTCTCCCGAGTTAGGTAATAGGCTCCAGCGTGTTCGAGTTCAACTTCCTGGACTTAACCAAGAGCTCCTTC AGAAATTCAGGGAAAAAAACATTGACTTTGCAGCTCATAATGCTCAAGAAGATTCAGGTTCTCTTCTATTTAACCTTATTGGGAATCTAGCTTTCCCTCT ACTCTTGATTGGAGGATTGTTCCTCCTCTCAAGACGACCCGGTGGGATGGGAGGTCCCGGTGGACCTGGATTTCCTCTTACTTTTGGTCAGTCTAAAGCC AAGTTTCAAATGGAACCAAGTACTGGAGTGACATTTGATGATGTTGCTGGGGTGGATGAAGCCAAGCAGGATTTCATGGAGGTGGTTGAGTTTCTGAAGA AGCCTGAAAGGTTCACTGCTGTTGGAGCTCGTATACCAAAAGGAGTTCTTCTTGTTGGTCCTCCAGGAACAGGGAAGACACTGTTAGCCAAGGCTATTGC TGGTGAAGCTGGTGTTCCATTTTTCTCAATCTCCGGTTCTGAGTTTGTTGAGATGTTTGTCGGTGTTGGTGCTTCTCGAGTACGTGATTTGTTCAAGAAG GCCAAAGAGAATGCCCCATGCATTGTTTTTGTTGATGAAATTGATGCTGTTGGAAGACAAAGAGGGACTGGAATTGGAGGAGGGAATGATGAAAGAGAAC AGACCCTCAACCAACTTTTGACAGAAATGGATGGGTTTGAGGGTAATACTGGTATCATTGTTGTTGCAGCAACTAACAGAGCTGACATTCTTGACTCTGC CTTATTGAGACCGGGTCGGTTTGACAGACAGGTAACAGTTGATGTTCCAGATGTAAGGGGAAGGACTGAAATCCTAAAGGTTCATGGTAGCAACAAAAAG TTTGATGCTGATGTTTCTCTTGAAGTAGTTGCAATGAGAACACCTGGTTTTAGTGGAGCTGATCTTGCAAATCTTCTGAACGAGGCTGCTATATTAGCTG GTCGACGTGGAAAGACAGCAATCTCATCTAAAGAAGTTGATGATTCTATCGATAGGATTGTGGCTGGAATGGAAGGAACAGTAATGACAGATGGGAAGAG CAAAAGCTTAGTGGCATATCATGAAGTTGGGCATGCCATTTGTGGAACTTTGACTCCTGGTCATGATGCGGTACAAAAGGTAACACTAGTTCCCCGTGGT CAAGCTCGGGGTCTTACATGGTTCATTCCTTCTGATGACCCAACTCTGATCTCCAAACAACAACTCTTTGCAAGAATTGTTGGAGGGCTAGGTGGTAGAG CTGCGGAGGAAATTATTTTTGGTGAACCAGAGGTTACAACTGGAGCAGCTGGTGATTTGCAGCAAATTACCGGTTTGGCAAAACAGATGGTAGTTACATT TGGAATGTCTGATATTGGTCCATGGTCACTTATGGACGCATCACAAAGTGGGGATGTTATCATGAGAATGATGGCAAGGAACTCAATGTCAGAAAAGCTT GCGGAAGACATTGACGCAGCAGTCAAGAGACTCTCCGACGAAGCATATGAAATTGCATTGACCCACATAAGGAACAACCGCGAGGCAATTGACAAGATTG TGGAAATCCTTGTGGAGAAGGAGACATTGACCGGAGATGAATTCCGTGCTCTACTGTCTGAGTTTGTTGAAATCCCAACTGAAAACAGGGTCCCTCCTTC AACTCCAGTACCAGCCACTGTTTGAATAGCCCAGATATAATATCTGTAATATGTATATCTCAGAATACCTCTACGGTATGTTTGTGAATGATAAAACTCC TAGTTCACTTCTTTACTCGTGTAGTGTTGTTGACAATAGAGTATGTGCCAAAGAGCAAATGTTTGTGTGTAAAAATTCAAAGCTTCTTTACACCTATATA TAATACAGTGTAACTTTTCTGATTAATTCCTGGTGTATCATTATAACTAGTGAGATGCAATGTCTAATATGAGTGCAAATTCTTTGTATTTGTGAAGTCT GGTTTTTTGACACCAATGTAAAGGATGGTAAATCTGGTTGGGTATCAAATTTTTGAGATGGGTTTTATCAGCAAGATGGTATATCAAGTACTGAAGGAGA CAGAAATGGACTTGATTGTAGCAATGGATGGCTAAGAGGAATTGCTGCAATCAAAGTTTGCTTATTATAATAAATAATTAAATTTAAGGATTTCATTG BLAST
Tissuepods
Gene nameLI_gene_157596; 
Additional informationdetails; 

Expression of Ll_transcript_328399

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_328399
BlastpATP-dependent zinc metalloprotease FTSH 2, chloroplastic from Arabidopsis with 83.91% of identity
BlastxATP-dependent zinc metalloprotease FTSH 2, chloroplastic from Oryza sativa with 88.3% of identity
EggnogActs as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
KeggLink to kegg annotations (AT2G30950)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019463651.1)
PfamFtsH Extracellular (PF06480.14)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;