| Id Trinity | TRINITY_DN48032_c5_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_327116 |
| Sequence | CATCAAATGAGTGGACAATCATCTTCATCATCATGCATCCATCCATTCTACCTAGTGGCACAAATCTGTAGGCAACCCCAAAAAATAAGAATAAAAAGTT TTTTTTTTGGTTTCTCACATGTATCATCGTACTTGAAGTAATCATCCACAAGTATGTGGGGCTAACTCTCCCATCAGACATTTTTTCATTCGAACCCGAG ACTTTGCTTGAGGGGAATCATGTACAACTTGGGAGAATACAAAATTTAAAAAGAAATAAAACAAAAAAGAAAAGAAAAGAAAAGTAACTTATGACGCACA TGGAGCATGAAGCTTCTTCATCTTCTCTCTCTAGTGAATAAAACCCTAAGTTCCTTGTATTGGAAGAATCGAATTGTGAATAATTATAATAGTAATAGTA ATTGTGAGTGAGTGAGTGAGTGATCGATGAAGCAGTTTCGTCGATGCCAGAGATTTCTTATCCTCTCTCTCCTCTCTCTTTCTGTTATCGCTCCTCTCGT TTTCGTTTCTCGCAGATTCAATGTTCTCTCTCCCCATGGACGAACAGCGTTTCTCGATGATTTTTCTACTGTTACATACAGGACAGACCCTTTAAAGTTA AATGCTATAGAACAGGAAGGTGCAGGAAAATTAGAAGAGCCAAAGCAAGTTGTTTATGAAGAAAAAGATTTTGGTTCTAGAGGTAATACCAGTGCTGAAA AGATTAATGATTCTGTGGAATCTAGACATGAAGTGCACAGAAACATATTTTTGGAAAGAAATGAATCCCAACATGACAAAGGACAAGACCAGGTAGCTCA GCATAAAGGATTATCCTCCTTGGATGGAGATAAGAAGAAAGTTAATACAACAGCCATGCACAATCAGAATATGCACACTCGTTCTGAAAGAATGGTAGAT GGTAACATCGAAATGGTAGATAAGCAATCTGGTAAGAAAAAAACCCAACATCAGATTTCACGCTCTCGGCCTCGTAAAGTGGGAAATCAGAAGGTTGAGG AGATTAGGGATCAAATTATTAGAGCCAGGGCATACTTGAGCTTTATTCCAGCAAGCAGGAACTCACCCCTGGCGAAGGAGTTGAAGCTGCGAATTAAAGA GATGGGGCGTGCAGTTAGAGAAGCTACAAAGGATTCAGATCTGTCAAGGAGTGCTTTGCAGAAAATGAGACACATGGAGGCTTCATTGTCTAAAGCTCAC CGTGCTTTCCCAGACTGCACTGCTATGGCTACTAAGCTCCGTGCAATGAATCATAATGCTGAAGAGCAAGTTAGGACTCAGCGATACCAAACATCATATC TTGTTCATCTTGCTGCAAGGACCACACCGAAAGGTTTCCACTGTCTTTCTATGCGGCTGACTACTGATTACTTCTCTCTGAGGCCCGAGGAGAGGAAGTT TCCAAATGAAAATAAGATTCATGATCCAAAACTTCATCATTATGCAGTATTCTCAGACAATATTCTGGCGTGTGCAGTGGTTGTAAACTCCACTGTCTTT ACTGCCAAGGAACCGGAGAAACTTGTTTTGCATGTATTGACCAATCCACTCAACTTTCCAGCAATCTCGATGTGGTTCTTATTAAACCCTCCTGGAAAAG CCACCATCCACATACAGAACATAGACAACATTAAATGGTTGCCCAAGGACAATACCTTCAAGAAACTTAATTCCAGCGATCCAAGATATACATCCGAGTT GAACTACTTGCGTTTCTACCTGCCAGACATCTTCCCAACTCTAAATAAGATCGTGCTCTTTGATCACGATGTGGTGGTGCAACGAGATCTCAGTAGACTA TGGGATGTCAATATGAATGGAAAAGTCATTGCAGCAGTTGGGACATGTAAGGAAGGTGAAACTCCATTTCATAGGATGGATATGTTCATAAACTTCTCAG ATCCATTCAATGCAAAGAGGTTTGATGTCAATGCTTGCACATGGGCGTTTGGGATGAACTTGTTTGATTTGCAAAAGTGGAGGAGACATAATTTAACTGC TGTTTATCACAAATATTTGCAAATGGTATGTTAAAGAAACACCTTTACTTTGTTGCAGGCTTTTCTTTTCTTGGTTCACAGAGTAACTAGTTTTATTCCC CCAACAATTTTTCTTGCATTTAAATGTCATTAAACCTCCAGCTTGACTCTTCGCATTGAAAAAGTAATGAGGTTACAATGCTTTATTTTCATCTGTTTCC TTGAAATTGCCTTGTATTACTAGTGGGCAATTTTCTTTCGCATTAGAATGCTTAAGGTAGTAGTTTATGACTTCTTAAAATGATTTTTTTTACCTCGTTA ATATTTGTATAAGATCAAAGATTTGAACATCCCATGGCATATTCAGGGTTATTCTAACTGGTGTTTTCATATTTATAATTTTGGTGGTTGTATATGATAA TTCGGGAATACGTCTAAGCTCTAGTTCAAATTGAAATTAATAGAGCAGGTATAAGCTTGTGATACAATTATAATCTAATGTGTTTATATGGGTTTATAAT TGCAGGGTTTTGAGAGGCCATTGTGGAACATTGGCAGTCTGCCTCTAGGCTTGGTTACATTCTATAACAAGACAAAGTTTTTGGACAGACGGTGGCATGT TCTTGGGCTTGGTTTCAATTCCGAGGTCGAAAGAAATGTGATTGAAGGTGCTGCCGTTATACACTACAATGGAATTAGGAAGCCATGGTTGGATATTGCA ATGGGAAGATATAAGAATTATTGGACCAAATTTTTAAAGTTTGATCATCCTCTTCTGCAACGCTGCAATCTCCAGGTGTAGCCCAAAATCTGAATATGAA GGTTTTAAATTGTGGTTGTGGATGCAACACAATTTGATTATGCAATCACAATTACAATTGCAACGCGGTTGCAGAGATTATGAAAAGCACAATATTCTGG CCCTTGATTGCGATCGCGATTGCGGATCTTATTTGAAATATTCTTGTACCTGGTATGTGTTGTTTAATTAGTTTGATCTCAGTCGATTCTTTGTTGTTTT TGGGAATTGTTCTTGTAAAGCTCTTCACTCACAGCTCCTCAAAATTTCTATACATACTTTTTTTAGAAGGTTAGCTAATCTGTAGTGACATTTAAAATGA AATGAATAATAATAATAATAATAATAATAACAAGCCATTTTAGCTTTAGAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_157611; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_327116
| Blastp | Probable galacturonosyltransferase 6 from Arabidopsis with 49.53% of identity |
|---|---|
| Blastx | Probable galacturonosyltransferase 6 from Arabidopsis with 49.53% of identity |
| Eggnog | Galacturonosyltransferase(ENOG410YA0P) |
| Kegg | Link to kegg annotations (AT1G06780) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456475.1) |
| Pfam | Glycosyl transferase family 8 (PF01501.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |