| Id Trinity | TRINITY_DN48040_c0_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_325858 |
| Sequence | AAACCTTGTATCAACTTAAGAGTGGGTGGGTTGAGCAGGGTTAGGGTCAATGTTGGTGCTGAACTCAAGCTAATGCTAGAATGCTGATTGTAGTTGGAGA ATGATTGACATTGCAAATTAGTGACCACAAATAAGTCAAGGCTTGTGCATTGATTAAACTTGGAATTGGATCAAATATTATCCGAAACTACTATATTACT AATTCAAGGAGAGAATTGCAGTCGGCTAGTCAAAAGAAACTAACTTGGTGGCCCTGGTGTTTTGATTATGGCTGATACTACAGTTACATCAGACCAATCT TCTACTTCCTCGCTGAACGCTGCTCGAATAATCTGTCACGTATGTCACACACAGTTTTCCCAGTACACATGTCCTCGATGCAATTCAAGATACTGTTCCC TCCAATGTTACAAAGTAAGTAAAGTTTACCTATATGCTGACTTGAGCTAGTTATAAGCTTATGATAAATTATGTGTTGCAAGGCTCTGTGTCTGGCCAGA CAACATTTACTAAAATTTGGATTTCCTATCATGTTATGTGACATTGGCATGTCAAGACTTGATATTTATATGCTACAAATATTTTTGAATGGAGCAAAAT GATTCACTGGATGAGGAAGTGTGCTTAAATTGTTTAAGTATTTTGGAAATTCACTTAATATTTTCGATGCTTAGCATCATGAGGACATTTTACAGGATAA ATTATATTTGGGTTTATCAATGCATTTCCCCCTCTTCTCTTTCCATCTGAATTATTCCAAATTTGGCATTGTATGTACTTTCGACATGCTATCAAGCTAG GATACTGTTCTAGTAGTGTGCCTTGTTTTGCATGTACTATGTATATTACTGTGCTTTTATTTTTTCTACTTCGGCGAGCAGTCCAAATATTCTAACGAGC CTTTTATTTTGGCAATTGGTTAAATTTTTGTTGGATGTTTATGATTTTGAAAAATGGTTTTTACTTGCATGCTATTTCTATAGATAACTCTGATCTTGAC CCTTATTTTCTTATAAACCGCTATGAACATTATCCTTTATGTTGTAATTTTGACAGTCTCATAGTCTTCGTTGTACTGAATCCTTCATGCAAGAAAATGT AGTTCAGGAGCTTCAGCAAATGCAACCTGATGAACAAATGAAACATAAAATGTTGGACATACTGAAAAGATTTCATTCAGAAGAGGAAATGGATAGCATG GATGAGGATTCTTCTGCAGATTCAACTTTATCTGAGGAGACACTGGAAAAAATATTGTCTGGAGAAGAAATCAGTTTTGATGATTTATCGCTGGAGGAGA AGAAACGGTTTCAAAGAGCTATTGCATATGGGGACTTGAGCAAGATGATCAAACCGTGGGATCCATGGTGGTCAAAGCCTTCTGCCAGGAAAATCCGACT TAGTAGGGAAGGAACTCAACTTGTTCAACCTCTTTCAGAGCAGGAACTACCGGATGATATTGGAAGTAATGAATCCACCGACATTCCTTTTGGCCCTGAA ACGCCACTTCCTCCTCTTAGCACACTTAGTTCGAAGGAGCCGTCACCCCTCTTAACTGTCCACCTAGTTGATATTTTATATAGCTACTGCTTCACTCTTC GCCTCTACAATGGAGATTGGAGGTCAGATGCTTTAGGGTCAGTCATGGTTGTACTAAACGTGTCGTTGGTCTTGGGTCAAGGTGGGCAGCCGGAGACTGT ATTGGAAGCTCTCTCTCATTGCTTGGAGCAGATTTGCTCTCCAGCTTATAGACACATGGGTGGACTGCAATTTGGTTTGGCTGTTGTTCATGATGTGATA AGCCTCCTTGAATTGGGAAGTTCTGCTTTGCTGTGTGCCTTTTGTGATATGCATCGGTTGATTCGGGAAGGGGAAAAGGAAGCCAAATCAGAAAAGCGAA GGAAGGATGAGATCAGAAGTACTATTAAGCTGGCAGAGAGGAAGACATATTTCATCATGTGTTGGGTTCATGAGCAGCCAGAGGAAGTGTGGTCTTCTTT AGCAGCCATAGTGAGTGCAGAAAAGACAATCATGGAATCCCAAAGGAGTAATAAGGCTGAAATTTTGAACAATAAAGGAGCAACCAAAGGCAAATGCATA ATTGAGGAGATTCAATGATTTACTCACACTATCAAGCCCTTACTTGTGTTAGTCATATTTATTTATCTATATTTAGAGGTGTAAATACCCAATTTTGACC AGGGTAAACTTTTCAAAAAAAAAAATAATAAAAGAGGGGGAATCATTTTTTTAAGCATTGGTGGCAGCTGGGCTTTCTTCCTCTAGCCCAACCAGATTAG GATAAATTTAACCCTAATCCTACTCCCATAAAAAGCTAAAATTAGCTACAAAAAACCCTAACTAGGAAAAAGAGAGAAGGAGGCACCTTGTTTTTTCAAA AGGAGAATAGAGTAGAGAAGAGGAAGCACCAAGAGGTCCATGTGTCATCTTCATCACCTTCGAGCTCTCTTTAGGTTCATTCACTTTCTCATTCTTTTCC ATTTGTCATTGTATGTGTGTCTGTACTAACTTTTTCTAAAATAAACTCATCTATGTTTAAAGCAGTGTTGTAAAAACCGTACCGTACCGGCCGGTTCAAC CGGAAAACCGGTGAACCAGACCCCTAATCGGTACGGTACATATGTTGAATGGCCAAATTTCAAAACCGGTGAAAACCGGTAAACCGGCCGGTTTTGGTGA AAACCAGTCAGTTTATACATATTTTTTTTAAATAAAAGCCAAAAAAATAAAAATAAAAACATTCCCCTTCATTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_157691; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_325858
| Blastp | Zinc finger HIT domain-containing protein 2 from Homo with 26.28% of identity |
|---|---|
| Blastx | - |
| Eggnog | zinc finger(ENOG4111VC9) |
| Kegg | Link to kegg annotations (741) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434973.1) |
| Pfam | SHQ1 protein (PF04925.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |