Id Trinity | TRINITY_DN48051_c1_g1_i5 |
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Name Transcript | Ll_transcript_326643 |
Sequence | GTAAAACACAACTAGTTTTCAGCCCTATCTATCCACATTTTCAAAAGTTCCCTCCCACTTGGATTCATTGACCGTTCTATTTCAAAGAATGAAAATACTA TAACCTTTCCTAACCTTACCCACTTGTGTAATTAAATTTTAGTAGTCTCTGTTCAATATCAACTGTAATTTATGTGACTCAATTTGCAATAAGAGACAGA ATGTTTGGTTCAAATAGATCTCCTCTAAAAGCTGCTAAACCTAGCTCAGGTGGTCCTGTTAAATCTGTGCCCAATCCATTTGATTCTGATGATGAAACAA AGGATAACAAAGACTATAATTCATCAAGGAAGATTTCGTCAGAACGCGCGCTAGTTGCATTAGACACCATTTCGAACCCTTTTGATGATGTTAATGCCGA TACGAACCCTTTTGGTGACGTTGATGCCGATACAAACTCTTCATCATCTTCGTATGCCCTTCGATCAGCAGACCGAAACATGTATAAGAATGATTTCTGT TATGCTGGGGGATTAGAGAATAAATCGGTGCAAGAGTTGGAGGGTTATGCTGTTTATAAGGCTGAAGAGACTACAAAATCTGTCAACAATTGTTTGAAGA TAGCAGAGACAATAAGAGAGGATGCCACCCAAACTTTAGTTACCCTTCATCAACAAGGTGAGCAAATTACCAGGAGTCACTATGTTGCTGCTGACATTGA TCGGGATTTAAGCCGGGGAGAAAAGCTTTTAGGCACCCTTGGTGGCTCTTCAGTAAAACTTGGAGACCGAATAAGACACGTGCCATTACAGGCCCCATTA TCTTTGGAGATGATCCGGTCGGAAGTAAGGGCAGCCATTTGGAGCAGAGAGAGAAGCTGGGATTGACTTCTGTGCACAAAGAGCAGCCCAAACCGCGGAC ACTTCCTCAGGAACCAACAAATGCACTTGAAAAAGTTGAGGTTGAAAAGGGGAAGCAAGATGATGCACTGTCAGGTTTAAGTGATATATTGGGAGAGCTG AAAGAAATGGCTATTGACATGGGATCTGAAATTGAGAGGCACAACAAAGCCCTGAATCATGTAGACAATGATATGGAAGAGTTGGTTTCCCGTGTGAAAG GTGCCAATCAACGCGGCCGTCG BLAST |
Tissue | pods |
Gene name | LI_gene_157776; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_326643
Blastp | SNAP25 homologous protein SNAP33 from Arabidopsis with 50.25% of identity |
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Blastx | SNAP25 homologous protein SNAP29 from Arabidopsis with 47.58% of identity |
Eggnog | Synaptosomal-associated protein(ENOG410Y3Y0) |
Kegg | Link to kegg annotations (AT5G61210) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436093.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |