Id Trinity | TRINITY_DN48053_c3_g1_i3 |
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Name Transcript | Ll_transcript_327768 |
Sequence | TGATTGAATATATGTAAGTTTCTTCCCTTGACTATGAAACTTGGACCTTTTAACATGCCAATAATTTGTCTAATTTATAATTGATTGCTATACAATGAGG CTTTATAATTGATTGTTTTTGGAAGGAATGCTCTGGAACCCTCTCACAATTGTATTTCATGGTTTTCAAGCCTTCCATTTCTCTCCATTCCCTTCCAAAA ACTAACTTGCATACAGACCCCAAGTTATTCTGTTAGTTTCTGTTCACTCATGTATCTAACAGTTTGAGTGGTAGGAGTCCACCTCCTTGGAGAGAAATCT GAATTAACCATAATTCTTATCCTAAGTTAAACAGAGACATCAGAATGTGTTATTTGAATATGCGCTACTGAAACTATTCTGAAGTCTCTTAATTACTATC CAGAGTACATAGAGAATGGCTGTTTATTGACCCCATAGGACTCAAACTGAGTGGACTCTTAAATTACTGGATTTATGCCTTTTGACTTACTCTTAGTGTA CTTTTCGTTACATGGACCACTTCCCTAATTACAAAATTGGATTTTCCTACACTTAACTAACTTATAAATAAAATATGGTGAGTTCTACATTTGAATACAT ATGAAGTCGATCCACCTAGTAGTTGTACTAAAGCTTGGTTGTTGTTATAGTTCTAGACTTGAACACATAGAACCGTGACTCTAGTTTATAAAATATCTAT TATAATAATATTTTCTTCATCAGTATCTAAACGACTATACCTTAATTTGTGCCATTTGACGTTGCCCTCTTTGTTGATTTAGGTACACTGATGGTTTGGA GAAAATAGACCCAGATCAGGCTGAGGAAATGTTTGATGTTGCTTCTAGATACTTATTATTTCCTCTTAAGCGTGCCGTTGCTGATGTATTGTTGCCACAC TTGGAAATGGTGTCGCCAGAAGAACTCTGCCATTGGCTAATACTAGCTGACATGTATGGTGTCATCAAGATTCGGGAATATTGCCTAGACACTATTGCAT GCAATTTTGAAACATTTGCTGATACTAAAGAATTCCGGGCAATGCTATTGACATTACCTCCACCATCCGGCGACTCCTCTCTTCGTACCACTGTCCCAAG CGTTCCTGGTTCTTCTCTAAACACTGACCAAGGAAACCTTCTCGATGATTTACGTGAGAAATGGCTTGAAATCGAAGCTGCCGAGCTCGACAAGAGAGAC GAGAGTGCACTGCAGTTCGATCACCGCCTTGAGATGCTTCTGCATGTTGCAGAGCAAGAAAACTCAGGTGCACAAAAGCAACCATAGATTTCAGATCATA CAGTTCTTTTAAGAGAAAATCAAAATAAAGTGTAATTTAGATTTTGTATGTCATGAATCCATAGCAGGATACTGAGTTAGATGGCTCGGAGTGCTTAAGT TTGTTTTTTTGTAACTTTGGTTGCTCAGAGCATTAATTGATTCTTATAAGTTATTTTCAATGTTTACATGTTAATAACTTTATGTGTTCTTTTCACAGAA AGTTGCTTTTTTTCTGCAAGTAGAGACAACTTTTTCCCTATTAGAACATAGTGAGGTTTTAATACTTAATAGATGCAGTGTGACAATTAGACTGTAAATA ATCGATTTTGTTTAATTTATGGAATATTTATGCTCTAAGTGTCATGTATATATCTTTTAAGAAAGTTGTTGGATTAGTTAAG BLAST |
Tissue | pods |
Gene name | LI_gene_157791; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_327768
Blastp | BTB/POZ domain-containing protein At2g04740 from Arabidopsis with 75.5% of identity |
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Blastx | BTB/POZ domain-containing protein At2g04740 from Arabidopsis with 74.4% of identity |
Eggnog | Ankyrin Repeat(COG0666) |
Kegg | Link to kegg annotations (AT2G04740) |
CantataDB | Link to cantataDB annotations (CNT0001043) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447476.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |