| Id Trinity | TRINITY_DN48059_c1_g4_i16 |
|---|---|
| Name Transcript | Ll_transcript_326586 |
| Sequence | CTTCCTAGTTCCAAATCCTACCCTGCTGAAACCGAGAAACCAAATCGAAATAAATCACTCACCACTTCCGACGAAGATAGTTGCGACGACGGAACTGAAA CAACAGATTCGATTCAAACCCTATTCCCAATTCATCACTTCTCCTACCACCTTCTCTCTCGCCGCTTCCTTCAGTGGAACTATGAAACTTTTGGTGTAAG ATAAACAAAAAACAAGCAATGTTTGAAGGACTTGTTCATCAATTGCTTCTTGGTTACCTAGGTCGTTATTTCAAAGATATCCAAAAAGAACAACTCAAGA TTAGGCTTGAGGAAGTGCTATTGGAGAATGTGGAGCTGATACTTGAAGCTTTTGATTATCTCCAGCTTCCATTTGCACTTACGAAAGGTCGAGTTGGGAG GTTAAGCATCAAAATTCCATGGAAAAAGCCTTGGGACCCCATTATAATCATTTTAGAGGATGTCTTTGTTTCTGCATCCCAGCGAGGTGATCAAGAGTGG AGTGCCGATGCTGTCGAAAAGAGAGAATTTGCTGGCAAAAAGGCCAAGCTAGCAGCAGCAGAATTGGGAAAATTATCAAGACGTGTGTGTGGCAGTAATG CTGGGCAATCATTTATTTCTCACGTCACTGCGAAGATTCTTGACAGTATTCAAGTGGACATACGAAATTTTCATATTTTATACAGTGACGTTCAGAATGA TCTGGGGCATATTATGTTTGGGTTGAAGTTTTCCAACTTGACCATGAAGCAAAATCCTATTGGGTCTTCAAATGGAAGGATGAGAGTGGGTCAAGAACAT AAAATTGTTGAGATCAAAGGACTGGAATTTTATTTCAGTATGTTTCGTGGTTCAATGGAATTGGTAACTATGAACAGTGTGGGCAATTACTCAGCAGGCA ATATAGGATCTGAAGGAAAACATAACAACTCTATATTGTCACCATGTGATGCAACCATAATTATTTCGGCTAACAGATCACAGAAGCTTGATGACAACAC TCCTCAGTATTCTATCACTGCTGAATTGACTGGTTTGGTTATATCCTTTGATGAGGCTCAGTTACAACAGATGTTACTTGTGTGGGATTATGTCTGCACT TGTAGATTAAGGGAAAAGTAAGTTCATTGCCAGACGCCTGCAACTGTTTGATTAGCACTATTAAAAAGATGCCTTTAGAAAAAAACTTTTGGTTGAGATA TAAATTGTAAATCAGTACTCCTTGTAGAAGCAATGTAATATCGAGATAGAAATATACAAAATGATAGACGGAATAAGGAAAAGATCTATGGAAGTTATTG TACTCTTCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_157864; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_326586
| Blastp | Vacuolar protein sorting-associated protein 13 from Sophophora with 27.91% of identity |
|---|---|
| Blastx | Vacuolar protein sorting-associated protein 13 from Sophophora with 26.91% of identity |
| Eggnog | Vacuolar Protein(COG5043) |
| Kegg | Link to kegg annotations (Dmel_CG2093) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019412966.1) |
| Pfam | N-terminal region of Chorein or VPS13 (PF12624.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |