| Id Trinity | TRINITY_DN48065_c3_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_326942 |
| Sequence | AATAATTCATTATGATGTTTTAAGTTTTTAACATGTATGATTTACTCTGCATCATGAATGTGTTGTGTGTTGAATGGTTAGGCTTGGAGTTGGGTCCCTA GTACTAGAGCAGGCAGAGTCACTTCGAACCAGTGGAACTTCACTCACCCTTTTCAAAAATGGGTGGAGGGTACTTGATGCAATCGGTGTAGCCAATGATC TCAGAACTCAATTCTTAGAAATTCAAGGCTGTACAGGATGGTGATCAAGTCCGTGGATGGGAGGGAATTGCGCGACTTCACTTTCAAAGAAGAGGATGAA AGCCAGGAGGTTCGTGCAGTGGAGAGGAGAGTACTTTTAGAAACTTTAGCTGGCCAGCTCCCCAAGGATACCATTCAATTTTCTTCAAAGGTAGCGAAGA TTGAAACAAGTCCGAACGGGGAGAGCATGTTGGAACTTACAGATGGGTCTCAGTTGCTTGCAAAGATTGTAATTGGGTGCGATGGGATTCGATCACCAAT AGCCAGGTGGATGGGGTTTCCTGAGCCAAAGTATGTTGGTCATTGTGCTTACCGTGGACTTGCCTCTTACCCAGATGGGCAGCCTTATGGACCAAGAGTG AATTACATCTATGGAAGAGGGTTGCGCGCTGGATATGTTCCTGTTTCTCCAACCAAAGTTTACTGGTTTATCTGCTTCAACAGTACATCACCAGGTCCTT AATAAAAACTCCACACATCACTTAACTTAATAGGCATCAGCATCTTTGTTATTTTGACTAGATATGCTGGTAGATATATAATACATTCAGTCAAGAGTTA TCACCTAGTAGCTTAAGCTTTTGAAGGTGTTAGTTGATAATATGATATCAGACAACAAAGGCACACAAATATCATTTTCTCTCTAGCATATCATGTGCAA TTAAGTTATTTTGACCAAATATGTTGTTAGAGATACAATAAAGTCATTAAACTGTCTTCACAAAATAACTTAAGCTTTTGCACACAAATGACTTTATTAT ATCTCTAACACATGCCATCTACTTTTGTGAGAGTTCTTATGAAATACGGTTATGAACTTATGAGTTATGACCAACGCAGGTTCAAAAATAACTGATTCAT CGCTGCGCAAGAAACTAGCCAAGGAACTAATCAGGAACTGGCCTTCAGAGCTTTTGAACATAGTGGACTCTACACCAGATGACACAGTGATTAGGACTCC ACTGGTAGATCGTTGGCTTTGGCCAACCATAACTCCACCTGCTTCTGCTGGTAGTGTTGTGCTGGTCGGAGATGCGTGGCACCCAATGACTCCCAATCTC GGTCAAGGTGCTTGTTGTGCACTTGAGGATGCTGTGGTTCTTGCTAAAAAACTTGCAGGAGCCATCAAGTCTGAAGACCCTTCTGTTGAAGAAGCTTTAA GGTCATATGGCACTGAAAGATGGTCTCGCGTATTTCCACTGAGCATACGTGCAAACCTTGTGGGTTCCCTTTTGCAGTGGGAGAACCCATTGGTGTGTTC TGTGAGAAACAACATTGTCATACCTAAGGTAGTCAGGCTTGGGCCATTGCTGGAGCATACAAATTTCACTTGTGAAAGTCTATAAAGCAAAAAGAAAAGC AGATTATTTTGTCAAGTGATGAGGAAATTCATTTCTTCTCAATACACCTTATACTGCATTTAATCATTGTAAAGATAAACACTTGTTCTCATTACTATTG CAATAGGTTGCTTGGTAAAACCAAGTATTCATGTTGTCTATGTTCATTGGTTTGTGGGAAATAATAGCTCATTGCCATCGACCAGTTGGGTTTATTCAAG TCTGAAATCTCACATTGGACATGTGGGAAGAGTGAAAGAGTTTATAAGTGGGAAAGGCCCATGAAACAAATATCTTAAGATTTTAGTTCAAGACGTGGTG TCTCACTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_157893; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_326942
| Blastp | Monooxygenase 2 from Arabidopsis with 31.07% of identity |
|---|---|
| Blastx | Monooxygenase 3 from Arabidopsis with 42.42% of identity |
| Eggnog | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(COG0654) |
| Kegg | Link to kegg annotations (AT4G38540) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445032.1) |
| Pfam | Squalene epoxidase (PF08491.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |