Ll_transcript_325884

• Id Trinity: TRINITY_DN48067_c4_g1_i1
• Name Transcript: Ll_transcript_325884
• Sequence: AGCAACAGCAACAACAACAACAACCACCACCAAAGAAGAGGCCGCACCAACAGCAACGTGCTCCCACTTCTTACTGCCTTAGACATTTTGCAGCTGATAA CAGCCAGACACACTCTGCTCATCACACTATCAATCTTGTCCATCCTCTTGCTCAAGACAACCAACCAAATCAAAATGAAAGGAACGACGAGGAAAACATT GATGATCCAAAGCTTAGTGAGCTTAAGGCAACATCAAACAATGCCCTAGATGCTGCTGCAGATAAGCCAGAGGCTTCAACAGCCAACCCTCACATGGCCA TGGAATCTGGCCCCTGCAGAGGAGCCAAAAGGAGAAAATCTGGTTCTGTGAAGAGGTTCAGGAGACAGGATGATGATGGTGCATCTAAGTCCAACCCAAC CACCGTATCAGTTGAACAAGGACAAAGAGGTGTGAATGGTGATGATAACAATGGTCACATGATGGGTGATGGGGCATCTGCCTTCCATATTGTAAAGATA ATAAGACCAATAGGCTACATGACTTCTTTTTCTAGTATTGTAGATGATCTTTCAGTCATCTTTGTGGCCTTGAGATCTGATGGAAGGGAAGTAACTGTGA CCAATAAGTATCTGAAGGCAAACAATCCACTTCTTCTGATCAATTACTATGAAGAGAATATCCGATACCATCCTATGTAGCTTGACTTAGCAAAGCATTG AAGGAACTTCTTCTTATAGTTAGATTTTCCTTGTAAGAGCATTGAAGAAGGAATATCTGTTTTAGATTTTCCTGTGTATGTTGTAGACGCAACCAATGGT GAAGGTTAAGGAACTCATTGTGTGCTGGTTATTATGATTAATCGGGTATATTACAATTAAACCAATTGTTTTAAATGCCTTCATGACTATATACTGTGAT GCCCAAGTATTTAACTTCATTTGTGTGTATGCAGTTTCACATAATTTTGCCTCTATATACCTTTAGTTCCATGTCATGCTTGTGTGAAGAAGTAGTTGAT CATAAAAGCCACGAGCCATGTCCCTAAGAGAGGGTAGGCATATGTTTAATACCTTTAAACCAAGGGCGACTCTGTGATACACCCCAAACTCCTTCAAGTG GCTTAAAAAAGTAGTCAGTTATTTTTTTTGAACTTAGTGATATGTACCTTGCTCACAACTATTCAACATTTCAAAGCTCCTCCTCACAATGAATATTGAA CTCGTCATCAGCGTGTTGAGTTTACATTGAACTATTCAACATTTTTCAAGCGATTTAGATTTGCTGCAGTTCTTCCGGTACATGTATGGTGTTTCCATTA TTATGCATTGAAAACAATGAACAATGTGAACTACAACAACCTCGGGTACACACCTATTAGCATTGTTGAGTTTTGATGTGTCTTCTCCATCTCCTGTCAC AATTGGTGATTGTAGCTTCTTCACACCAAAAACCATGACCATGGATTATATCTCCGTCACAGCCACCTTGAACTGCCAACAGGAAATGAGTCACCACCTA TGAAGCTTGTTCAATGATCAGTTCTAATCCAGCCCTCAATACTGCCCCGACTCCGTCCAATTCCCAGCTTAGGCAAACCTCGATTTAGTCCATCAAGCAG AACGCATGCTTTACACCATTTCTGCACATGAAACAGATAATATAACTTAGCTGTTCAAGTTCTGATGATGCAAGAGTGAAAATGAGAAAGAAAAAGGCCA AACAAGACCTTCAGAAGCACTAAGCATGCTTTGTTATGGACTAATCTTTGAAGCAGAGGAAAAAACAAAGAAGTAATCTGTAAGGTAAATCATGCACCTT CCTCATGAGGGGTCACGGTATCAAAGTAAAGCTGAGTTTTGAAATATACAGTAATAATGTTGTCCAAACGGCACAAA
• Tissue: pods
• Gene name: LI_gene_157913;
• Additional information: details;

Expression of Ll_transcript_325884

FPKM

• PAB: 7.6
• PNAB: 16.4
• PS1: 18.7
• PS2: 10.3
• PS3: 17.4
• PW1: 11.7
• PW2: 8.2
• PW3: 6.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_325884

• Blastp: Chromo domain protein LHP1 from Lycopersicon with 38.98% of identity
• Blastx: Chromo domain protein LHP1 from Lycopersicon with 37.85% of identity
• Eggnog: chromobox homolog(ENOG4111JKD)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438254.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;