Ll_transcript_325886

• Id Trinity: TRINITY_DN48067_c4_g1_i2
• Name Transcript: Ll_transcript_325886
• Sequence: AGCAACAGCAACAACAACAACAACCACCACCAAAGAAGAGGCCGCACCAACAGCAACGTGCTCCCACTTCTTACTGCCTTAGACATTTTGCAGCTGATAA CAGCCAGACACACTCTGCTCATCACACTATCAATCTTGTCCATCCTCTTGCTCAAGACAACCAACCAAATCAAAATGAAAGGAACGACGAGGAAAACATT GATGATCCAAAGCTTAGTGAGCTTAAGGCAACATCAAACAATGCCCTAGATGCTGCTGCAGATAAGCCAGAGGCTTCAACAGCCAACCCTCACATGGCCA TGGAATCTGGCCCCTGCAGAGGAGCCAAAAGGAGAAAATCTGGTTCTGTGAAGAGGTTCAGGAGACAGGATGATGATGGTGCATCTAAGTCCAACCCAAC CACCGTATCAGTTGAACAAGGACAAAGAGGTGTGAATGGTGATGATAACAATGGTCACATGATGGGTGATGGGGCATCTGCCTTCCATATTGTAAAGATA ATAAGACCAATAGGCTACATGACTTCTTTTTCTAGTATTGTAGATGATCTTTCAGTCATCTTTGTGGCCTTGAGGTTTGTTCCTCCCTACTAACAACTCC AAATTTCATTCTTACACCTTTCATTCATATCTTATAAGTGCATTCATTTTCCTCATTACTATGTTTGCTAAAATAGATTTTTCACAGATTTTGTTTTAAA GGTTTTTTTGTGTGAAGAATGGCATCCTTATTAAATGCATATTTCTACAAGCAGATAATCATCACTAGTAATTGATAAGCGAACTGGTGGATTACATTGT TAAGGTCTTTAAGTGGTGCATAAAATGCATTGTCTTAGTGCTACAATGATTAGTTTAATGGTTGATTATCTGTTTATTTACAATGTTTAAAATTAATTCT GTAATCTATTTAAACCTAGACCGTAGTTAAGACTTGAGAATGTAGATTTTAGCTCATAAATGTAGAATTTAAATTTTAAAGCAGCCTCCAATTTATTGTG ATTGAAACACAAGTTGTAGCAAAAGTAAGAAATTAACTCTTAACAGATTGGCATGCTTCTTTAGATAACAATGCTTATGTGATTAACTTTACAGATCTGA TGGAAGGGAAGTAACTGTGACCAATAAGTATCTGAAGGCAAACAATCCACTTCTTGTAATCTCCTATCTCTTAGATATACTTGATTATGTCTCATGTGGC TTAAAAGCCTTCTGAAAATGTTTCTGTGCCAACTTTTTTAACTCAAAGCTAATAGTTTTCTTAATATTGCAGCTGATCAATTACTATGAAGAGAATATCC GATACCATCCTATGTAGCTTGACTTAGCAAAGCATTGAAGGAACTTCTTCTTATAGTTAGATTTTCCTTGTAAGAGCATTGAAGAAGGAATATCTGTTTT AGATTTTCCTGTGTATGTTGTAGACGCAACCAATGGTGAAGGTTAAGGAACTCATTGTGTGCTGGTTATTATGATTAATCGGGTATATTACAATTAAACC AATTGTTTTAAATGCCTTCATGACTATATACTGTGATGCCCAAGTATTTAACTTCATTTGTGTGTATGCAGTTTCACATAATTTTGCCTCTATATACCTT TAGTTCCATGTCATGCTTGTGTGAAGAAGTAGTTGATCATAAAAGCCACGAGCCATGTCCCTAAGAGAGGGTAGGCATATGTTTAATACCTTTAAACCAA GGGCGACTCTGTGATACACCCCAAACTCCTTCAAGTGGCTTAAAAAAGTAGTCAGTTATTTTTTTTGAACTTAGTGATATGTACCTTGCTCACAACTATT CAACATTTCAAAGCTCCTCCTCACAATGAATATTGAACTCGTCATCAGCGTGTTGAGTTTACATTGAACTATTCAACATTTTTCAAGCGATTTAGATTTG CTGCAGTTCTTCCGGTACATGTATGGTGTTTCCATTATTATGCATTGAAAACAATGAACAATGTGAACTACAACAACCTCGGGTACACACCTATTAGCAT TGTTGAGTTTTGATGTGTCTTCTCCATCTCCTGTCACAATTGGTGATTGTAGCTTCTTCACACCAAAAACCATGACCATGGATTATATCTCCGTCACAGC CACCTTGAACTGCCAACAGGAAATGAGTCACCACCTATGAAGCTTGTTCAATGATCAGTTCTAATCCAGCCCTCAATACTGCCCCGACTCCGTCCAATTC CCAGCTTAGGCAAACCTCGATTTAGTCCATCAAGCAGAACGCATGCTTTACACCATTTCTGCACATGAAACAGATAATATAACTTAGCTGTTCAAGTTCT GATGATGCAAGAGTGAAAATGAGAAAGAAAAAGGCCAAACAAGACCTTCAGAAGCACTAAGCATGCTTTGTTATGGACTAATCTTTGAAGCAGAGGAAAA AACAAAGAAGTAATCTGTAAGGTAAATCATGCACCTTCCTCATGAGGGGTCACGGTATCAAAGTAAAGCTGAGTTTTGAAATATACAGTAATAATGTTGT CCAAACGGCACAAA
• Tissue: pods
• Gene name: LI_gene_157913;
• Additional information: details;

Expression of Ll_transcript_325886

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0.4
• PS2: 0.3
• PS3: 0.6
• PW1: 0.1
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_325886

• Blastp: Chromo domain protein LHP1 from Lycopersicon with 31.29% of identity
• Blastx: Cytoplasmic tRNA 2-thiolation protein 1 from Arabidopsis with 88.89% of identity
• Eggnog: chromobox homolog(ENOG4111JKD)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438254.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;