| Id Trinity | TRINITY_DN48068_c5_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_325922 |
| Sequence | GATGACGTGGTCCAATTATCTCGTCTCTCATTTTTAATAACTTCTTTATCTCTCATTGAACCCTCACATCAAGCCCATTTCTCCCTCCGCCGTGTCCATT TCCGACCAACCACCTCTATAACCACTGCGGCTTCCACATCACCCACCGCAAATTTCTCTCTCCGCCGCGCAAACCTCCGTGACTAAATCCCTTTCGCACT ATCTCTCTCCTCGTTTTCGTCCTGCTTCAGTTCCTATTCTCTCACCAGGTTTCTTTTTCTTTAGCCACCTTTTTAACTCAGAGGTAAACTTCTTGGAATT TGATAAGGCTATCATGGGTTATGCTCAACTTGTTATAGGCCCAGCCGGTAGTGGCAAGTCTACCTACTGCTCAAGTTTGTACGAACACTGTGTGGCTACT CGGCGAACGATACATATTGTGAACCTAGACCCTGCTGCTGAAAATTTTGACTATCCTGTCGCGATGGATATAAGGGAACTCATTTCGCTGGATGATGTTA TGGAGGAACTTGGATTAGGTCCTAATGGTGGTCTTGTATACTGCATGGAACACCTTGAAGATAACCTGGATGATTGGTTCAATGATGAACTGGACAATTA TTTAGATGATGATTACTTGGTTTTTGACTGCCCTGGCCAGATAGAACTTTATTCACATGTGCCAGTGCTTCGGAATTTTGTGGAACATTTGAAACGTAAA AATTTCAATGTTTGTGCCGTGTACTTGCTTGATTCACAGTTCATGACAGATGTGACCAAATTTATAAGTGGATGCATGGCATGCCTTTCTGCAATGGTTC AACTTGAACTTCCTCATGTTAACATCCTTTCAAAAATGGACCTTGTGACTAACAAAAAGGATGTTGAAGAATTCTTGGATCCTGAGCCCACCTTTTTACT GTCTGAATTAAATCAACGGATGGCTCCTCAGTTTGCAAAGCTGAATAAATCTTTGATTGAACTGGTGAATAATTATAGTATGGTGAGTTTTATACCACTG GATCTGAGGAAGGAGAGAAGTATACAATATGTATTGGCCCAAATTGACAACTGCATTCAGTATGGAGAAGATGCAGATGTGAAAGTTAAGGATTTTGACC AGGATGATGATGATGAGTAGTTTTATATACTTTTACAGTACTGCTTGGTATGATTGAAAGCTTAGTCTATCTTTGACAAAATCTTGTATCAAAGTCATTG GTAACAATAATATCTTGTGTTTTATTATATTGTTCTAGTGTGAATTGTCATGGTGCAATTTGCCAAAATGCCTTAAACCATGGGTGGTAAGAGTTTGGAC AGATAATTTTTACAAATTAACCTCAATGTGGTACTTGGTCAATCAATTGTGATCATTGAAGTTAAACATGAAAATTTTATATTGCTGCATTAGATGAAAT TGAACGTTTATGGGCACCACTACTTTAAATCAACTAATCTTTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_157933; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_325922
| Blastp | GPN-loop GTPase 3 from Danio with 54.23% of identity |
|---|---|
| Blastx | GPN-loop GTPase 3 from Danio with 53.73% of identity |
| Eggnog | GPN-loop GTPase 3(ENOG410XPBZ) |
| Kegg | Link to kegg annotations (100000326) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449856.1) |
| Pfam | Conserved hypothetical ATP binding protein (PF03029.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |