Id Trinity | TRINITY_DN48068_c5_g1_i3 |
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Name Transcript | Ll_transcript_325924 |
Sequence | CTACTTCGGTGATCTCTCCATCTTGAAAAGGATAAGTCTTCAGCTATCAGCTGAGGGGCACCCTTGATGGGCCCAATTATTATTATTATTTTACAATTAA ATGTTGGTGACATGTTAATATTGGTATAAAAGTCAATTAATGCATACATTAAACTCTGTCCTTCAGACTATAACAGTTGCCTTTTTATGAACTGTGTAGT GTGTACACCCCAAATAAAAAGAGAACAAAACCTTGCTTGTCCTATTTGTTTAACCTTAAATTTAACATTCCTTATACTTGCTTATAAAGTTTTTATTGAT ACGGACCTCACAAATTTGAGATCAATCAACATAGCCTTGTAATGTTTTATTGTTTTGCAGGCCAGATAGAACTTTATTCACATGTGCCAGTGCTTCGGAA TTTTGTGGAACATTTGAAACGTAAAAATTTCAATGTTTGTGCCGTGTACTTGCTTGATTCACAGTTCATGACAGATGTGACCAAATTTATAAGTGGATGC ATGGCATGCCTTTCTGCAATGGTTCAACTTGAACTTCCTCATGTTAACATCCTTTCAAAAATGGACCTTGTGACTAACAAAAAGGATGTTGAAGAATTCT TGGATCCTGAGCCCACCTTTTTACTGTCTGAATTAAATCAACGGATGGCTCCTCAGTTTGCAAAGCTGAATAAATCTTTGATTGAACTGGTGAATAATTA TAGTATGGTGAGTTTTATACCACTGGATCTGAGGAAGGAGAGAAGTATACAATATGTATTGGCCCAAATTGACAACTGCATTCAGTATGGAGAAGATGCA GATGTGAAAGTTAAGGATTTTGACCAGGATGATGATGATGAGTAGTTTTATATACTTTTACAGTACTGCTTGGTATGATTGAAAGCTTAGTCTATCTTTG ACAAAATCTTGTATCAAAGTCATTGGTAACAATAATATCTTGTGTTTTATTATATTGTTCTAGTGTGAATTGTCATGGTGCAATTTGCCAAAATGCCTTA AACCATGGGTGGTAAGAGTTTGGACAGATAATTTTTACAAATTAACCTCAATGTGGTACTTGGTCAATCAATTGTGATCATTGAAGTTAAACATGAAAAT TTTATATTGCTGCATTAGATGAAATTGAACGTTTATGGGCACCACTACTTTAAATCAACTAATCTTTTT BLAST |
Tissue | pods |
Gene name | LI_gene_157933; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_325924
Blastp | GPN-loop GTPase 3 from Ustilago with 45.61% of identity |
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Blastx | GPN-loop GTPase 3 from Ustilago with 45.86% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (UMAG_01243) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449856.1) |
Pfam | Conserved hypothetical ATP binding protein (PF03029.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |