Ll_transcript_327157

• Id Trinity: TRINITY_DN48076_c0_g1_i4
• Name Transcript: Ll_transcript_327157
• Sequence: AAAGAAGAATGAATGTGTCCCCTGAAAACAGAATCTGAAATTAGCGTTGTACTTGAGTTTGGTGTTGAATGATCATAACATCAGAGTTAGCAATGGAGAA GGAGAAAATGGATCTGAAGGATGAAGCGAACGGAGAAGAAGAAGAAGAAGAAGAAGATCCTTCATCATCGACACTTCTCGATCTCACCAGTTACCAACTC CACGATCTTGACTCGGTCGAGTTACCACTCACTCTCACCGAGTTAGACCTCACTTCAAATCGTCTTTCCACCCTCGACCCTCGCATTCAACACCTTTCCC TCCTCAACAAACTATCCCTCCGTCAAAACCTAATCACCGACGATGCCGTTTTACCCCTCTCTTCATGGACCTCACTCTCCCAACTCCAGGAGCTTGTGCT GAGGGATAATCATTTGAAGAAGATTCCAGATGTTACCATATTTAAGAAGCTTTTAGTTTTTGATGTTTCTTTCAATGAAATTACTTCTCTACATGGCTTG TCCTCTGTTTCCAACACGCTTAAAGAGCTCTATGTGTCCAAAAATGAAGTCCCGAAGATAGAAGAGATTCATCATTTTCATCAATTAAGCATTCTTGAAC TTGGTTCCAACAAATTACGGGTTAGTTATCTACTACACTCTATTTTACTGCATTATGAACAACAACAATGATGAGTAGAGAATAACTACTTAATTATAAT TTATAGCTGATGTGTGACACGACAATGTCATTCTTTTAGAGAGTGGATCAGGAAATATAGGTTGGTTGGCGAGATTTTCGAGCAGCAAGGTGATTAAGTT TTTTCCCTTTTGAGGTCATATGTTATATGTTTGGTGCTCGATGGAAGGTTCTAGATAGTTTCCTTAGGTAGGGAGTTTAGCTGAGATTAGGAGGTTCCTT GCCTAATAATGCGGCCTGCAGCTATTGCCTAATAATGCGGCCTGCAGCTATTGCCTAGAGTTGGCATGCCTAATTCAACCGAATGAGGGCTAGACTTGGA TGAACTCTCTTCGGCTCATCCTGCTATTGGGCCTACCGCCTACACGGCCCATGCGTGAGCAGAACTCTTATGTACATATTATATTCCATTCCATTGTGAC ATGTTTGGCAAATGCTGCCCCTTTTGCATGTTAATGAGTTAGTGAGTAGAATATGTGCTTCCTACATAGTACATAAGGCGTTTCATTGGCTATTGACGAT CTTACACATTTATTCTGAAATCGGTATTGAATGCATGTTTGACAACTCACTTCGGGTAGCATACCTCTCAGGTACCGTAGAAGTTCCCTACTTGCAGTAT TTAATGGAGCAAGACATGTGTGTGTTCTTATAGTTTCTCTGTATTTCTGATGGATTCAGGTGATGGAGAATTTGCAGAACTTGACAAATTTAGAGGAGTT GTGGCTTGGACGTAATAGAATTAAAGTTATAAATCTATGTGGTCTCAAATGCATCAAGAAGATTAGTTTGCAAAGCAATCGTCTCACTACAATGACAGGA CTTGAGGGTTGCATAGCGCTGGAAGAACTATATTTGAGCCATAATGGTATTTCAAAAATGGAAGGCCTGTCATCTTTAGTCAATCTCCGGGTTTTAGATG TATCATCAAATAAGCTAACCTCTATCGATGACATTCAAAACCTGATGCAATTAGAAGATTTATGGCTTAATGACAACCAAATAGAATCACTTGAAGGAAT TTCTGAGGCTGTTGCTGGTTCAAAAGAGAAGCTTACCACTATCTACCTAGAAAAGAACCCATGTGCTAAGTCACCCAACTATACTGCTGTGCTAAGGGAA ATCTTCCCCAACATCCAACAAATTGATTCTAATGTATTTTCTTAAAGAGTTTATTAGCTTCATCTGTTTTGAAAGAAAAAAAAACAGTAGCTTTGAAGCT TTGCCATTTAATATCCATTTTTTCGGGCTTGAAAGATTGGTGATTTTCCTGCCCACCTGATTAAGAGAATTTGCTAAGCAACCATTGGACATTGTTGTGT GGCCTGACCATTGGTTCACGGTGGAATGAAGATACTTGTTCAATGTTTCTTGTTTAGCAGACCACATTTTGCTCTATTTATGTTTATTTGGCAACCAAAT TTTGAAGTGACGTTTCTTTGCTGTGTTTTTTATTTTTCTTGCTACCTTTGCAGATGAAGATTTAGTTTAGTGATGGTCTAGATAGTCTTCCAAATTTGTT TGACTGATTTAATCCATGACCCATTATTTATTGTTTGTCATATTACCATCCTTCCCTTCTAAA
• Tissue: pods
• Gene name: LI_gene_158003;
• Additional information: details;

Expression of Ll_transcript_327157

FPKM

• PAB: 0.5
• PNAB: 1.4
• PS1: 0.8
• PS2: 0.4
• PS3: 1.5
• PW1: 0.8
• PW2: 1.2
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_327157

• Blastp: Protein phosphatase 1 regulatory subunit 7 from Mus with 36.36% of identity
• Blastx: Protein phosphatase 1 regulatory subunit 7 from Rattus with 42.25% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (66385)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446359.1)
• Pfam: Leucine Rich repeat (PF13516.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;