Ll_transcript_327158

• Id Trinity: TRINITY_DN48076_c0_g1_i5
• Name Transcript: Ll_transcript_327158
• Sequence: AAAGAAGAATGAATGTGTCCCCTGAAAACAGAATCTGAAATTAGCGTTGTACTTGAGTTTGGTGTTGAATGATCATAACATCAGAGTTAGCAATGGAGAA GGAGAAAATGGATCTGAAGGATGAAGCGAACGGAGAAGAAGAAGAAGAAGAAGAAGATCCTTCATCATCGACACTTCTCGATCTCACCAGTTACCAACTC CACGATCTTGACTCGGTCGAGTTACCACTCACTCTCACCGAGTTAGACCTCACTTCAAATCGTCTTTCCACCCTCGACCCTCGCATTCAACACCTTTCCC TCCTCAACAAACTATCCCTCCGTCAAAACCTAATCACCGACGATGCCGTTTTACCCCTCTCTTCATGGACCTCACTCTCCCAACTCCAGGAGCTTGTGCT GAGGGATAATCATTTGAAGAAGATTCCAGATGTTACCATATTTAAGAAGCTTTTAGTTTTTGATGTTTCTTTCAATGAAATTACTTCTCTACATGGCTTG TCCTCTGTTTCCAACACGCTTAAAGAGCTCTATGTGTCCAAAAATGAAGTCCCGAAGATAGAAGAGATTCATCATTTTCATCAATTAAGCATTCTTGAAC TTGGTTCCAACAAATTACGGGTGATGGAGAATTTGCAGAACTTGACAAATTTAGAGGAGTTGTGGCTTGGACGTAATAGAATTAAAGTTATAAATCTATG TGGTCTCAAATGCATCAAGAAGATTAGTTTGCAAAGCAATCGTCTCACTACAATGACAGGACTTGAGGGTTGCATAGCGCTGGAAGAACTATATTTGAGC CATAATGGTATTTCAAAAATGGAAGGCCTGTCATCTTTAGTCAATCTCCGGGTTTTAGATGTATCATCAAATAAGCTAACCTCTATCGATGACATTCAAA ACCTGATGCAATTAGAAGATTTATGGCTTAATGACAACCAAATAGAATCACTTGAAGGAATTTCTGAGGCTGTTGCTGGTTCAAAAGAGAAGCTTACCAC TATCTACCTAGAAAAGAACCCATGTGTAAGCTTATTTTCTAGTCTTGCAAAATTGAGGTTTTTTGACACATTTATATTTGTACATTGGGCCATACATATT TTTTTACCTTTATATTTGCAGATTGAGCCTTGCAAATAACATGTGTTTTATTTTTTTCTTGTTGGGGCATTCATCAGTTTCTCAACTATCATTTTATCTT ATTAGCGAGTTATATGAGGCTATGAGCATATAGTATTAATAGGCCACATATTTTTATCATGTTGCTTACTGTGTATATGGGTTTTCTCAATGCAATGTAG CTTTTCTTTACTATTCCATTTTGGGATTTGGCTGGAGAAATAGATCAAGGCATTGTAAAAGTGTCATTTGTTTGTTTCATTGTTGTATAATTTCAGTGTA GAGCCTTTAATTGTATTGGTTTTCTTTATCCCACATTATTGGACTTTTCTATCTCTCCGACTCCTGTATAGTTTTCGACTTTCATTGTATTGGTTTTCTA GAATGAAGCTTACTTTGACATTTATACTGCCCTTCAATGGTAGATTCCGTGTTATACATCGCGAAGATGATACCGTTTTTTGCAGTTATATGATGTATTT CTTAAAGAAATAATCTTGCTTTTTTCTGACAGGCTAAGTCACCCAACTATACTGCTGTGCTAAGGGAAATCTTCCCCAACATCCAACAAATTGATTCTAA TGTATTTTCTTAAAGAGTTTATTAGCTTCATCTGTTTTGAAAGAAAAAAAAACAGTAGCTTTGAAGCTTTGCCATTTAATATCCATTTTTTCGGGCTTGA AAGATTGGTGATTTTCCTGCCCACCTGATTAAGAGAATTTGCTAAGCAACCATTGGACATTGTTGTGTGGCCTGACCATTGGTTCACGGTGGAATGAAGA TACTTGTTCAATGTTTCTTGTTTAGCAGACCACATTTTGCTCTATTTATGTTTATTTGGCAACCAAATTTTGAAGTGACGTTTCTTTGCTGTGTTTTTTA TTTTTCTTGCTACCTTTGCAGATGAAGATTTAGTTTAGTGATGGTCTAGATAGTCTTCCAAATTTGTTTGACTGATTTAATCCATGACCCATTATTTATT GTTTGTCATATTACCATCCTTCCCTTCTAAA
• Tissue: pods
• Gene name: LI_gene_158003;
• Additional information: details;

Expression of Ll_transcript_327158

FPKM

• PAB: 0.5
• PNAB: 1.2
• PS1: 0.8
• PS2: 1.1
• PS3: 1.6
• PW1: 1.4
• PW2: 1
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_327158

• Blastp: Protein phosphatase 1 regulatory subunit pprA from Dictyostelium with 42.19% of identity
• Blastx: Protein phosphatase 1 regulatory subunit 7 from Homo with 41.83% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (DDB_G0284039)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446359.1)
• Pfam: Leucine Rich repeat (PF13516.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;